RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SERPINB9P50453 376 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PFN3P60673 137 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LPAL2Q16609 132 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RBM20Q5T481 1227 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CYP4X1Q8N118 509 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CLDN19Q8N6F1 224 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 BIRC8Q96P09 236 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RUFY1Q96T51 708 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NDNQ99608 321 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PHPT1Q9NRX4 125 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DNAH14Q0VDD8 3507 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 THADAQ6YHU6 1953 aa18.7■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ITGA2BP08514 1039 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MSH3P20585 1137 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FMO4P31512 558 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NSG1P42857 185 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ADARP55265 1226 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMEM115Q12893 351 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PDE1CQ14123 709 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMED2Q15363 201 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PLK5Q496M5 336 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CTSL3PQ5NE16 218 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MROH9Q5TGP6 573 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ARMCX6Q7L4S7 300 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LPCAT2Q7L5N7 544 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ADGRG6Q86SQ4 1221 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SLC6A18Q96N87 628 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TRIM39Q9HCM9 518 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ATXN10Q9UBB4 475 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TMEM98Q9Y2Y6 226 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MYCLP1P12525 358 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ATP1B2P14415 290 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PKMP14618 531 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RPS3P23396 243 aaKnown RBP eCLIP18.69■□□□□ 0.583e-7■■■□□ 17.4
TNFRSF1A-213ENST00000540022 SIM2Q14190 667 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KYAT3Q6YP21 454 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CEP68Q76N32 757 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DET1Q7L5Y6 550 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ABI3BPQ7Z7G0 1075 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RIBC1Q8N443 379 aaPredicted RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GPATCH11Q8N954 259 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RASGEF1AQ8N9B8 481 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 HEXDCQ8WVB3 486 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DCUN1D1Q96GG9 259 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GPR22Q99680 433 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 AARSD1Q9BTE6 412 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CLPBQ9H078 707 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 OR2AG1Q9H205 316 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 NCDNQ9UBB6 729 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LGALS13Q9UHV8 139 aa18.69■□□□□ 0.58
TNFRSF1A-213ENST00000540022 GON4LQ3T8J9 2241 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PLXND1Q9Y4D7 1925 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FAM95CA0A1B0GW59 222 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TRIM49D1C9J1S8 452 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CFAP99D6REC4 459 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ATP8B1O43520 1251 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SGTAO43765 313 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KRT38O76015 456 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CDK14O94921 469 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ASMTLO95671 621 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SNRPAP09012 282 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 RALBP11234 206 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CNTFP26441 200 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TPRG1LQ5T0D9 272 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PMS2CLQ68D20 193 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DOK6Q6PKX4 331 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 C11orf74Q86VG3 221 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 OR13H1Q8NG92 308 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MZB1Q8WU39 189 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 DNASE2BQ8WZ79 361 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 SGF29Q96ES7 293 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MIR1-1HGQ9H1L0 117 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MED16Q9Y2X0 877 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PCDHB1Q9Y5F3 818 aa18.68■□□□□ 0.58
TNFRSF1A-213ENST00000540022 IQANK1A0A1B0GTG1 560 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 A6NNZ2 444 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 IQCF5A8MTL0 148 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 FOXO6A8MYZ6 492 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CACNB4O00305 520 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 VEGFDO43915 354 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KRT37O76014 449 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ESR1P03372 595 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 HOXC4P09017 264 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ZNF8P17098 575 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 POLD2P49005 469 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 PGGT1BP53609 377 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CTSCP53634 463 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 LGSNQ5TDP6 509 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 HECTD2Q5U5R9 776 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 MACC1Q6ZN28 852 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 Q6ZSR6 202 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 TAOK1Q7L7X3 1001 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CROCCP2Q86T23 111 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 KIAA2013Q8IYS2 634 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 C1orf216Q8TAB5 229 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ELMO2Q96JJ3 720 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 ZCCHC2Q9C0B9 1178 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 CAB39LQ9H9S4 337 aa18.67■□□□□ 0.58
TNFRSF1A-213ENST00000540022 AASDHPPTQ9NRN7 309 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms