RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 FIS1Q9Y3D6 152 aa18.12■□□□□ 0.49
COPS7A-210ENST00000539735 ARIH1Q9Y4X5 557 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-210ENST00000539735 PCDHGC4Q9Y5F7 938 aa18.12■□□□□ 0.49
COPS7A-210ENST00000539735 TNFRSF10AO00220 468 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 PSMD12O00232 456 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 TRIM38O00635 465 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 UBFD1O14562 309 aaKnown RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 CFLARO15519 480 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 NARSO43776 548 aaKnown RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 SUPT7LO94864 414 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 CES1P23141 567 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 PSMA3P25788 255 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 DPP6P42658 865 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 ZNF140P52738 457 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 TIAL1Q01085 375 aaKnown RBP eCLIP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 FASTKQ14296 549 aaKnown RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 SEMA3AQ14563 771 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 GK5Q6ZS86 529 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 RAB44Q7Z6P3 723 aaPredicted RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 PNPLA1Q8N8W4 532 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 OR13C4Q8NGS5 318 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 ALG14Q96F25 216 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 NPAS2Q99743 824 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 TDRD1Q9BXT4 1180 aaKnown RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 TFB2MQ9H5Q4 396 aaKnown RBP18.11■□□□□ 0.49
COPS7A-210ENST00000539735 OBP2AQ9NY56 170 aa18.11■□□□□ 0.49
COPS7A-210ENST00000539735 GPC4O75487 556 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 SLC4A1P02730 911 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 PIM1P11309 404 aaPredicted RBP18.1■□□□□ 0.49
COPS7A-210ENST00000539735 PMLP29590 882 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 GDI1P31150 447 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 KCNC1P48547 511 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 ACADVLP49748 655 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 AQP4P55087 323 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 PKNOX1P55347 436 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 AFTPHQ6ULP2 937 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 APCDD1Q8J025 514 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 CPXM2Q8N436 756 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 CATSPER1Q8NEC5 780 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 HMGCLL1Q8TB92 370 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 THG1LQ9NWX6 298 aaKnown RBP18.1■□□□□ 0.49
COPS7A-210ENST00000539735 LHX3Q9UBR4 397 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 SUCOQ9UBS9 1254 aaKnown RBP18.1■□□□□ 0.49
COPS7A-210ENST00000539735 PACSIN3Q9UKS6 424 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 FCF1Q9Y324 198 aaKnown RBP18.1■□□□□ 0.49
COPS7A-210ENST00000539735 SPO11Q9Y5K1 396 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 RAI2Q9Y5P3 530 aa18.1■□□□□ 0.49
COPS7A-210ENST00000539735 ACOT8O14734 319 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 PRLP01236 227 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 FGF4P08620 206 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 PSME3P61289 254 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 RHOAP61586 193 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 MED21Q13503 144 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 LRRC36Q1X8D7 754 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 MPPE1Q53F39 396 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 INO80DQ53TQ3 878 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 LARP4Q71RC2 724 aaKnown RBP eCLIP18.09■□□□□ 0.491e-6■■■□□ 16.7
COPS7A-210ENST00000539735 CLYBLQ8N0X4 340 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 DCAF4L2Q8NA75 395 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 ICA1LQ8NDH6 482 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 LPCAT1Q8NF37 534 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 ASB9Q96DX5 294 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 CDKN2AIPNLQ96HQ2 116 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 TRAPPC9Q96Q05 1148 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 TCF12Q99081 682 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 SLC25A23Q9BV35 468 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 SYTL2Q9HCH5 934 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 CACNA2D2Q9NY47 1150 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 CLEC4EQ9ULY5 219 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 DUSP12Q9UNI6 340 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 DTNAQ9Y4J8 743 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 PCDHGA7Q9Y5G6 932 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 MT-CO1P00395 513 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 UBTFL6P0CB48 400 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 SRFP11831 508 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 FCHO2Q0JRZ9 810 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 PDAP1Q13442 181 aaKnown RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 LRP8Q14114 963 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 TAF1AQ15573 450 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 REP15Q6BDI9 236 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 HACD2Q6Y1H2 254 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 RPS27LQ71UM5 84 aaKnown RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 UBALD2Q8IYN6 164 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 PTGR2Q8N8N7 351 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 BHLHE22Q8NFJ8 381 aaPredicted RBP18.09■□□□□ 0.49
COPS7A-210ENST00000539735 RIN3Q8TB24 985 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 C19orf60Q96EN9 201 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 ZFYVE19Q96K21 471 aa18.09■□□□□ 0.49
COPS7A-210ENST00000539735 K7ERQ8 282 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 SNRPB2P08579 225 aaKnown RBP18.08■□□□□ 0.48
COPS7A-210ENST00000539735 VCLP18206 1134 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 NAA20P61599 178 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 MRPS22P82650 360 aaKnown RBP18.08■□□□□ 0.48
COPS7A-210ENST00000539735 MS4A2Q01362 244 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 TRAF2Q12933 501 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 ZNF77Q15935 545 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 PPP1R3AQ16821 1122 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 GRAMD1BQ3KR37 738 aa18.08■□□□□ 0.48
COPS7A-210ENST00000539735 UGT3A2Q3SY77 523 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms