RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ROBO1Q9Y6N7 1651 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 WTIPA6NIX2 430 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PRR5-ARHGAP8B1AHC4 643 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SSNA1O43805 119 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TULP3O75386 442 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 MPSTP25325 297 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 MAPK10P53779 464 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ARHGAP8P85298 464 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SRSF11Q05519 484 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SMCO1Q147U7 214 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 MTX3Q5HYI7 312 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 VARS2Q5ST30 1063 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 BICRALQ6AI39 1079 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 DRICH1Q6PGQ1 229 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 OTOP3Q7RTS5 596 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CMC1Q7Z7K0 106 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PACS2Q86VP3 889 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ING3Q9NXR8 418 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SLC17A7Q9P2U7 560 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 AK5Q9Y6K8 562 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RGPD2P0DJD1 1756 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 A0A0G2JLL6 359 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 FADS2P1A8MWK0 482 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PPP1R11O60927 126 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 LILRA4P59901 499 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SRP54P61011 504 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 STXBP1P61764 594 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 DLG1Q12959 904 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 DGKZQ13574 1117 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 GPR107Q5VW38 600 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RBM44Q6ZP01 1051 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CHST15Q7LFX5 561 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PRRT2Q7Z6L0 340 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CDH24Q86UP0 819 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 UNC5BQ8IZJ1 945 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RFKQ969G6 155 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ROPN1LQ96C74 230 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 NTPCRQ9BSD7 190 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 BRINP2Q9C0B6 783 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CAB39LQ9H9S4 337 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 EVLQ9UI08 416 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF142P52746 1687 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SCN11AQ9UI33 1791 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 XKRYO14609 159 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 MSI1O43347 362 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 NOL4O94818 638 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CDK14O94921 469 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RASGRP1O95267 797 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ASLP04424 464 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 DBTP11182 482 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PRPS2P11908 318 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 IGFBP5P24593 272 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TRIM32Q13049 653 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TEAD4Q15561 434 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PLA2G4EQ3MJ16 856 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RBM23Q86U06 439 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 JAZF1Q86VZ6 243 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PPP1R13LQ8WUF5 828 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 AGAP2Q99490 1192 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SDCBP2Q9H190 292 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SETD1AO15047 1707 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SLC22A2O15244 555 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 IRAK2O43187 625 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SEPT4O43236 478 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 NSG1P42857 185 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PTGER3P43115 390 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CDH13P55290 713 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TSTD2Q5T7W7 516 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 REP15Q6BDI9 236 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PTF1AQ7RTS3 328 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 AMIGO2Q86SJ2 522 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 LRRC17Q8N6Y2 441 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 GLB1L3Q8NCI6 653 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 OR6K2Q8NGY2 324 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CLEC4DQ8WXI8 215 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 HAVCR1Q96D42 359 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PNPLA8Q9NP80 782 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CCDC177Q9NQR7 707 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 AP4B1Q9Y6B7 739 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 SLC38A8A6NNN8 435 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CCNFP41002 786 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 CLCQ05315 142 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 GK5Q6ZS86 529 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 MOB2Q70IA6 237 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 WFIKKN2Q8TEU8 576 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ZNF483Q8TF39 744 aaPredicted RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 METTL21AQ8WXB1 218 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ALG3Q92685 438 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 RIPOR3Q96MK2 946 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 PWWP2AQ96N64 755 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 NOL11Q9H8H0 719 aaKnown RBP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 LGALS13Q9UHV8 139 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 H3BNX3 289 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 STX16-NPEPL1H3BU86 382 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 STX16O14662 325 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 TM7SF2O76062 418 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ALOX5P09917 674 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 DDX6P26196 483 aaKnown RBP eCLIP6.43□□□□□ -1.38
LSAMP-207ENST00000539563 HSD17B2P37059 387 aa6.43□□□□□ -1.38
LSAMP-207ENST00000539563 ARFIP1P53367 373 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms