RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 EPHB1P54762 984 aa8.78□□□□□ -1
DDB1-213ENST00000539332 PTPN5P54829 565 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ADARP55265 1226 aaKnown RBP8.78□□□□□ -1
DDB1-213ENST00000539332 SESN3P58005 492 aa8.78□□□□□ -1
DDB1-213ENST00000539332 IRX4P78413 519 aa8.78□□□□□ -1
DDB1-213ENST00000539332 TMPRSS15P98073 1019 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ZP2Q05996 745 aa8.78□□□□□ -1
DDB1-213ENST00000539332 DLG1Q12959 904 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ZNF234Q14588 700 aa8.78□□□□□ -1
DDB1-213ENST00000539332 LIN52Q52LA3 116 aa8.78□□□□□ -1
DDB1-213ENST00000539332 FNDC3BQ53EP0 1204 aaKnown RBP8.78□□□□□ -1
DDB1-213ENST00000539332 FASTKD1Q53R41 847 aaKnown RBP8.78□□□□□ -1
DDB1-213ENST00000539332 ACSBG2Q5FVE4 666 aa8.78□□□□□ -1
DDB1-213ENST00000539332 IER5LQ5T953 404 aa8.78□□□□□ -1
DDB1-213ENST00000539332 TMEM164Q5U3C3 297 aa8.78□□□□□ -1
DDB1-213ENST00000539332 HECTD2Q5U5R9 776 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ZNF549Q6P9A3 640 aa8.78□□□□□ -1
DDB1-213ENST00000539332 AAGABQ6PD74 315 aa8.78□□□□□ -1
DDB1-213ENST00000539332 SERPINA13PQ6UXR4 307 aa8.78□□□□□ -1
DDB1-213ENST00000539332 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
DDB1-213ENST00000539332 TMPRSS6Q8IU80 811 aa8.78□□□□□ -1
DDB1-213ENST00000539332 NUDCD3Q8IVD9 361 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ADHFE1Q8IWW8 467 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ALDH16A1Q8IZ83 802 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ZNF366Q8N895 744 aa8.78□□□□□ -1
DDB1-213ENST00000539332 PDCD6IPQ8WUM4 868 aaKnown RBP8.78□□□□□ -1
DDB1-213ENST00000539332 SKA1Q96BD8 255 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ELMO2Q96JJ3 720 aa8.78□□□□□ -1
DDB1-213ENST00000539332 UBXN10Q96LJ8 280 aa8.78□□□□□ -1
DDB1-213ENST00000539332 NDNQ99608 321 aa8.78□□□□□ -1
DDB1-213ENST00000539332 AARSD1Q9BTE6 412 aaKnown RBP8.78□□□□□ -1
DDB1-213ENST00000539332 TSSK1BQ9BXA7 367 aa8.78□□□□□ -1
DDB1-213ENST00000539332 TMEM245Q9H330 911 aa8.78□□□□□ -1
DDB1-213ENST00000539332 MTG2Q9H4K7 406 aa8.78□□□□□ -1
DDB1-213ENST00000539332 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
DDB1-213ENST00000539332 NMRAL1Q9HBL8 299 aa8.78□□□□□ -1
DDB1-213ENST00000539332 NPHS2Q9NP85 383 aa8.78□□□□□ -1
DDB1-213ENST00000539332 NDE1Q9NXR1 346 aa8.78□□□□□ -1
DDB1-213ENST00000539332 THEGQ9P2T0 379 aa8.78□□□□□ -1
DDB1-213ENST00000539332 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
DDB1-213ENST00000539332 TLK1Q9UKI8 766 aa8.78□□□□□ -1
DDB1-213ENST00000539332 VPS9D1Q9Y2B5 631 aa8.78□□□□□ -1
DDB1-213ENST00000539332 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
DDB1-213ENST00000539332 ACOT9Q9Y305 439 aa8.78□□□□□ -1
DDB1-213ENST00000539332 VWA7Q9Y334 891 aa8.78□□□□□ -1
DDB1-213ENST00000539332 WASF2Q9Y6W5 498 aa8.78□□□□□ -1
DDB1-213ENST00000539332 MUC3AQ02505 3323 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 K7EQS6 105 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 KRT36O76013 467 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 ALPIP09923 528 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PABPC4LP0CB38 370 aaKnown RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 GLULP15104 373 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PGM1P36871 562 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 RANBP1P43487 201 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 TNFRSF4P43489 277 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 KIR2DL1P43626 348 aaPredicted RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 RECQLP46063 649 aaPredicted RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 TTPAP49638 278 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 CDKN2DP55273 166 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 RAD51Q06609 339 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 BST1Q10588 318 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 LSAMPQ13449 338 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PON2Q15165 354 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PTPRRQ15256 657 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 HNRNPA1L2Q32P51 320 aaKnown RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 CNPY1Q3B7I2 92 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 TMEM196Q5HYL7 178 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 FOXB2Q5VYV0 432 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 ATG16L1Q676U5 607 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 LRRC8EQ6NSJ5 796 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 TPRG1Q6ZUI0 275 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 ACAD11Q709F0 780 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PIANPQ8IYJ0 282 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 CBARPQ8N350 705 aaPredicted RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 CHST14Q8NCH0 376 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 HCAR2Q8TDS4 363 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 KCTD4Q8WVF5 259 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 SCRN2Q96FV2 425 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 ACOX2Q99424 681 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 ZDHHC4Q9NPG8 344 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 THAP10Q9P2Z0 257 aaPredicted RBP8.77□□□□□ -1.01
DDB1-213ENST00000539332 KLF15Q9UIH9 416 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 PKP3Q9Y446 797 aa8.77□□□□□ -1.01
DDB1-213ENST00000539332 C1orf232A0A0U1RR37 186 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 EDDM13A0A1B0GTR0 161 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 NPIPB15A6NHN6 443 aaPredicted RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 SHISA7A6NL88 538 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 EIF4E1BA6NMX2 242 aaKnown RBP8.76□□□□□ -1.01
DDB1-213ENST00000539332 AGAP14A8MT82 685 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 SERPINE1P05121 402 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 PRSS56P0CW18 603 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 HLA-EP13747 358 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 HNRNPLP14866 589 aaKnown RBP eCLIP8.76□□□□□ -1.01
DDB1-213ENST00000539332 CPA3P15088 417 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 CTPS1P17812 591 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 GRK2P25098 689 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MC4RP32245 332 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 HNF1BP35680 557 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 MAGEA8P43361 318 aa8.76□□□□□ -1.01
DDB1-213ENST00000539332 PRKAA2P54646 552 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms