RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CLCNKAP51800 687 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 RPL26P61254 145 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC25A11Q02978 314 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 GALNT2Q10471 571 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 GALNT3Q14435 633 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 QPCTQ16769 361 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 CCDC122Q5T0U0 273 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 TIGD7Q6NT04 549 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 APTXQ7Z2E3 356 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 TEKT4Q8WW24 435 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 KLHL6Q8WZ60 621 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MAML1Q92585 1016 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 TRIM11Q96F44 468 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 ZDHHC12Q96GR4 267 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MLPHQ9BV36 600 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 AKIRIN1Q9H9L7 192 aaPredicted RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 CELSR2Q9HCU4 2923 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 PDE7BQ9NP56 450 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 ACSS2Q9NR19 701 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 POT1Q9NUX5 634 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 HAUS2Q9NVX0 235 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MAP10Q9P2G4 905 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 RPL26L1Q9UNX3 145 aaKnown RBP13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 MAP4K5Q9Y4K4 846 aa13.77□□□□□ -0.21
SMARCA4-206ENST00000538456 DOPEY1Q5JWR5 2465 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 ENO4A6NNW6 628 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 SORBS2O94875 1100 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 RECKO95980 971 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 PIRTP0C851 137 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 MYBL1P10243 752 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 BRAFP15056 766 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 FOLR1P15328 257 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF7P17097 686 aaPredicted RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 NELFEP18615 380 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 CES1P23141 567 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 COL8A1P27658 744 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 PTPN4P29074 926 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 GJC1P36383 396 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 CD86P42081 329 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 MRPL49Q13405 166 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 IL10RAQ13651 578 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 UGT8Q16880 541 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 NCBP2-AS2Q69YL0 99 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 ZNF787Q6DD87 383 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 CYB5D1Q6P9G0 228 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 LRRTM4Q86VH4 590 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 SIDT2Q8NBJ9 832 aaKnown RBP13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR26Q8NDV2 337 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 EID2BQ96D98 161 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 ING2Q9H160 280 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 TRIM39Q9HCM9 518 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 SLC40A1Q9NP59 571 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 RARRES3Q9UL19 164 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 MYO6Q9UM54 1294 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 LRBAP50851 2863 aa13.76□□□□□ -0.21
SMARCA4-206ENST00000538456 IGHV5-51A0A0C4DH38 117 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 RGSL1A5PLK6 1076 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 LRRC10BA6NIK2 292 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 ANKRD66B4E2M5 251 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 CHUKO15111 745 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 KMOO15229 486 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 KLHL30Q0D2K2 578 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 PIGHQ14442 188 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 IFI16Q16666 785 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 FAM182AQ5T1J6 154 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 TTC30BQ8N4P2 665 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 PRR7Q8TB68 274 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 THAP4Q8WY91 577 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 GLYATL1Q969I3 302 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 TIMM29Q9BSF4 260 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 ZSCAN5AQ9BUG6 496 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 ADGRE3Q9BY15 652 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR87Q9BY21 358 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 MFRPQ9BY79 579 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 HSD3B7Q9H2F3 369 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 ZFYVE1Q9HBF4 777 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 CUEDC1Q9NWM3 386 aaPredicted RBP13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 ANAPC7Q9UJX3 599 aa13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 PCDHGA9Q9Y5G4 932 aaKnown RBP13.75□□□□□ -0.21
SMARCA4-206ENST00000538456 TCP11X1B4DZS4 312 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR89AB7ZAQ6 455 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 MMP2P08253 660 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 GPR89BP0CG08 455 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 SKILP12757 684 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 IDSP22304 550 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 CCNCP24863 283 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 PTGIRP43119 386 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 RPS15P62841 145 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 DPYSL3Q14195 570 aa13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 PAFAH1B3Q15102 231 aaKnown RBP13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
SMARCA4-206ENST00000538456 KHDC1Q4VXA5 237 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms