RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 DTX3LQ8TDB6 740 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ACMSDQ8TDX5 336 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SKA2Q8WVK7 121 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SREK1Q8WXA9 508 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FAM136AQ96C01 138 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SERAC1Q96JX3 654 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 LENG8Q96PV6 779 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 VPS35Q96QK1 796 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GPR22Q99680 433 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 AARSD1Q9BTE6 412 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 MIR1-1HGQ9H1L0 117 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 OR2AG1Q9H205 316 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GPAMQ9HCL2 828 aa10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 WSB2Q9NYS7 404 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 NFKBIL1Q9UBC1 381 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ZFR2Q9UPR6 939 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 RUVBL2Q9Y230 463 aaKnown RBP10.55□□□□□ -0.72
TNFRSF1A-211ENST00000538363 OR2AG2A6NM03 316 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FADS2P1A8MWK0 482 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FOXO6A8MYZ6 492 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 PRAMEF26H0Y7S4 382 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 PHGDHO43175 533 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GPR39O43194 453 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SPINT1O43278 529 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 MAGEC1O60732 1142 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 AP2A2O94973 939 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 APOA4P06727 396 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 NR1D1P20393 614 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 RGS4P49798 205 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CCR5P51681 352 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 PPP2R2AP63151 447 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 WSCD2Q2TBF2 565 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TTMPQ5BVD1 217 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 RBM20Q5T481 1227 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ZNF648Q5T619 568 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TMEM220Q6QAJ8 160 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ADAMTSL4Q6UY14 1074 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CEP68Q76N32 757 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 OTOAQ7RTW8 1153 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRIM74Q86UV6 250 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRABD2AQ86V40 505 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 HEATR4Q86WZ0 1026 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRAPPC5Q8IUR0 188 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ZNF454Q8N9F8 522 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 PLA2G15Q8NCC3 412 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 MGARPQ8TDB4 240 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ASB12Q8WXK4 309 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 LPGAT1Q92604 370 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 INPP5DQ92835 1189 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FOXJ1Q92949 421 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 BOCQ9BWV1 1114 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRPM6Q9BX84 2022 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 C6orf106Q9H6K1 298 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRIM39Q9HCM9 518 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CD248Q9HCU0 757 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FZD3Q9NPG1 666 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CD93Q9NPY3 652 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 C2orf42Q9NWW7 574 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 OGFRQ9NZT2 677 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FAM8A1Q9UBU6 413 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ZNHIT2Q9UHR6 403 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TSR3Q9UJK0 312 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GRID1Q9ULK0 1009 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 SMG5Q9UPR3 1016 aaKnown RBP10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 DMTF1Q9Y222 760 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TMEM98Q9Y2Y6 226 aa10.54□□□□□ -0.72
TNFRSF1A-211ENST00000538363 KMT2EQ8IZD2 1858 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 IGHV1OR15-9A0A0B4J2B8 117 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TRBV5-4A0A0C4DH59 114 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 VEGFDO43915 354 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GLRA3O75311 464 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 NIPSNAP2O75323 286 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 C2P06681 752 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 VCLP18206 1134 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 RPS3P23396 243 aaKnown RBP eCLIP10.53□□□□□ -0.723e-7■■■□□ 18.4
TNFRSF1A-211ENST00000538363 DGKAP23743 735 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 GABRB3P28472 473 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FNTBP49356 437 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 ATP1A2P50993 1020 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TAS2R39P59534 338 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 IL2P60568 153 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CREB5Q02930 508 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 BOP1Q14137 746 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 PTK2BQ14289 1009 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 FAM83EQ2M2I3 478 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TMEM259Q4ZIN3 620 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 AGAP9Q5VTM2 703 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CWF19L1Q69YN2 538 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 TSSK4Q6SA08 328 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CRTC3Q6UUV7 619 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 LPCAT2Q7L5N7 544 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 RD3Q7Z3Z2 195 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CCDC91Q7Z6B0 441 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 CMC1Q7Z7K0 106 aa10.53□□□□□ -0.72
TNFRSF1A-211ENST00000538363 NKAPQ8N5F7 415 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms