RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 AGMOQ6ZNB7 445 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 TFAP2DQ7Z6R9 452 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 LDB1Q86U70 411 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 GTF2IRD2Q86UP8 949 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 ZFAND4Q86XD8 727 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 HID1Q8IV36 788 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 KIAA2013Q8IYS2 634 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 C8orf59Q8N0T1 100 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 RYBPQ8N488 228 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 C3orf58Q8NDZ4 430 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 LPPQ93052 612 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 C1orf74Q96LT6 269 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 MUS81Q96NY9 551 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 NSUN5Q96P11 429 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 RTP3Q9BQQ7 232 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 FEM1AQ9BSK4 669 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 WDR12Q9GZL7 423 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SOX17Q9H6I2 414 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 NOL6Q9H6R4 1146 aaKnown RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SP110Q9HB58 689 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 SPC25Q9HBM1 224 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 INIPQ9NRY2 104 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 MIOSQ9NXC5 875 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 CRYL1Q9Y2S2 319 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 TIMM13Q9Y5L4 95 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-218ENST00000537641 HS3ST4Q9Y661 456 aa12.05□□□□□ -0.48
CPSF7-218ENST00000537641 OR51F1A6NGY5 319 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 H3BMM5 538 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF623O75123 536 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 KATNA1O75449 491 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 MLYCDO95822 493 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 GOT2P00505 430 aaKnown RBP12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ALDH2P05091 517 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ALPLP05186 524 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 FGF1P05230 155 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 RHOQP17081 205 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 HLA-DPA1P20036 260 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 PAX3P23760 479 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 CRHBPP24387 322 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ELK4P28324 431 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 AFF1P51825 1210 aaKnown RBP12.04□□□□□ -0.48
CPSF7-218ENST00000537641 RPS3AP61247 264 aaKnown RBP12.04□□□□□ -0.48
CPSF7-218ENST00000537641 NKX3-2P78367 333 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 DSC2Q02487 901 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ITKQ08881 620 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 FAM98BQ52LJ0 330 aaKnown RBP12.04□□□□□ -0.48
CPSF7-218ENST00000537641 MFSD14CQ5VZR4 134 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 IGFN1Q86VF2 1251 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 METTL23Q86XA0 190 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 PARP8Q8N3A8 854 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 SLC22A17Q8WUG5 538 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 CASP10Q92851 521 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 VPS33AQ96AX1 596 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 SDCCAG3Q96C92 435 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 PABPC5Q96DU9 382 aaKnown RBP12.04□□□□□ -0.48
CPSF7-218ENST00000537641 RNF145Q96MT1 663 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 SERPINB11Q96P15 392 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 SEPHS2Q99611 448 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 PKMYT1Q99640 499 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 LHPPQ9H008 270 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 NTN4Q9HB63 628 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 CATSPERZQ9NTU4 200 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 COMMD8Q9NX08 183 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 USE1Q9NZ43 259 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 RNF112Q9ULX5 631 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 CORINQ9Y5Q5 1042 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 DOCK4Q8N1I0 1966 aa12.04□□□□□ -0.48
CPSF7-218ENST00000537641 CASP8AP2Q9UKL3 1982 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 LCHNA4D1U4 455 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 J3QRK9 145 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ARNTLO00327 626 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 KLK8O60259 260 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SYNCRIPO60506 623 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CYP11A1P05108 521 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SLC10A3P09131 477 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 JAK1P23458 1154 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 GRIK1P39086 918 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 STC1P52823 247 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 OR4D2P58180 307 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 UFM1P61960 85 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 OCA2Q04671 838 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 CRHR2Q13324 411 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 BTG3Q14201 252 aaPredicted RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MAPRE1Q15691 268 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 FUT11Q495W5 492 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TIGD5Q53EQ6 642 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 EGFLAMQ63HQ2 1017 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TMEM214Q6NUQ4 689 aaKnown RBP12.03□□□□□ -0.48
CPSF7-218ENST00000537641 FRA10AC1Q70Z53 315 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 C14orf80Q86SX3 495 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ZNF555Q8NEP9 628 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 PJA1Q8NG27 643 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 ARRDC2Q8TBH0 407 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 SH3RF2Q8TEC5 729 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 MUL1Q969V5 352 aa12.03□□□□□ -0.48
CPSF7-218ENST00000537641 TMBIM1Q969X1 311 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms