RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 EBNA1BP2Q99848 306 aaKnown RBP8.21□□□□□ -1.1
NEDD8-207ENST00000533242 ARL8BQ9NVJ2 186 aa8.21□□□□□ -1.1
NEDD8-207ENST00000533242 HEY2Q9UBP5 337 aa8.21□□□□□ -1.1
NEDD8-207ENST00000533242 VPS28Q9UK41 221 aa8.21□□□□□ -1.1
NEDD8-207ENST00000533242 PSAT1Q9Y617 370 aa8.21□□□□□ -1.1
NEDD8-207ENST00000533242 IKBKGQ9Y6K9 419 aa8.21□□□□□ -1.1
NEDD8-207ENST00000533242 SPTY2D1-AS1A0A0U1RR47 76 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CFAP69A5D8W1 941 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 FAM159BA6NKW6 160 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 AQP9O43315 295 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 BNIP3LO60238 219 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CLDN11O75508 207 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 NEBLO76041 1014 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TNFSF15O95150 251 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ANP32DO95626 131 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 GSRP00390 522 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 RPSAP08865 295 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CCR1P32246 355 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 RABIFP47224 123 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 RPIAP49247 311 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 RPS21P63220 83 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SEPT7Q16181 437 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 LINC00303Q3SY05 128 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ANKRD20A2Q5SQ80 823 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ANKRD20A1Q5TYW2 823 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ANKRD20A3Q5VUR7 823 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SEL1L3Q68CR1 1132 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TLDC1Q6P9B6 456 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ZCCHC23Q6ZST2 131 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PARGQ86W56 976 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 KIRREL3Q8IZU9 778 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 OR52K2Q8NGK3 314 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 OR2A12Q8NGT7 310 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 GLMNQ92990 594 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ALKBH8Q96BT7 664 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PPP1R16AQ96I34 528 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TMEM120AQ9BXJ8 343 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PIGVQ9NUD9 493 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TXLNGQ9NUQ3 528 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PCMTD2Q9NV79 361 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ZFP69BQ9UJL9 534 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 FZD10Q9ULW2 581 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TBC1D30Q9Y2I9 924 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PLLPQ9Y342 182 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 COPEO14579 308 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 DCTN3O75935 186 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ITGA2BP08514 1039 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SNRPAP09012 282 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CCNFP41002 786 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SULT1E1P49888 294 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CDH4P55283 916 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 BST1Q10588 318 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SEMA5AQ13591 1074 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PERM1Q5SV97 790 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CES3Q6UWW8 571 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ZDHHC17Q8IUH5 632 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 CDKL3Q8IVW4 592 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 MCUQ8NE86 351 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 FBXO27Q8NI29 283 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 BTN2A2Q8WVV5 523 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 NAT6Q93015 286 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 LIN37Q96GY3 246 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 TBATAQ96M53 351 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 LENG8Q96PV6 779 aaPredicted RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SLC2A13Q96QE2 648 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 GORASP1Q9BQQ3 440 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 BOCQ9BWV1 1114 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SLC17A9Q9BYT1 436 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 STARD5Q9NSY2 213 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 MOCS1Q9NZB8 636 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 ARMCX1Q9P291 453 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 SPASTQ9UBP0 616 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 IL36AQ9UHA7 158 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 IPO11Q9UI26 975 aaKnown RBP8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PCDHGA7Q9Y5G6 932 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 DOCK4Q8N1I0 1966 aa8.2□□□□□ -1.1
NEDD8-207ENST00000533242 PMS2P1A4D2B8 440 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 POM121BA6NF01 834 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 ZNF487B1APH4 448 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 TMX2-CTNND1H3BSU7 103 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 AP1G1O43747 822 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 CREB3O43889 395 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 PEX11AO75192 247 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 ENTPD5O75356 428 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 SPAG6O75602 509 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 ITGB2P05107 769 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 MYL2P10916 166 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 SFTPCP11686 197 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 JUNDP17535 347 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 PSMB4P28070 264 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 SESN2P58004 480 aaPredicted RBP8.19□□□□□ -1.1
NEDD8-207ENST00000533242 WASHC5Q12768 1159 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 NME3Q13232 169 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 FGL2Q14314 439 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 DEFB133Q30KQ1 61 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 SLC25A52Q3SY17 297 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 TEX44Q53QW1 395 aa8.19□□□□□ -1.1
NEDD8-207ENST00000533242 COLEC12Q5KU26 742 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms