RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 EIF3EP60228 445 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 VAC14Q08AM6 782 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 XRCC4Q13426 336 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 BIRC2Q13490 618 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 SNAP47Q5SQN1 464 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 BROXQ5VW32 411 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 PHYKPLQ8IUZ5 450 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 OR4D9Q8NGE8 314 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 CCDC110Q8TBZ0 833 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 SNRNP27Q8WVK2 155 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 JPH3Q8WXH2 748 aaPredicted RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 SLC39A7Q92504 469 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 VPS35Q96QK1 796 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 CMKLR1Q99788 373 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 SARS2Q9NP81 518 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 WDR70Q9NW82 654 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 WDR37Q9Y2I8 494 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 R3HDM2Q9Y2K5 976 aaKnown RBP17.55■□□□□ 0.4
SMG1-203ENST00000532700 SLC30A1Q9Y6M5 507 aa17.55■□□□□ 0.4
SMG1-203ENST00000532700 A8MU76 341 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 K7ENP7 123 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 ARHGAP6O43182 974 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 MTSS1O43312 755 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 EPOP01588 193 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 RBP3P10745 1247 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 RPL10P27635 214 aaKnown RBP17.54■□□□□ 0.4
SMG1-203ENST00000532700 SLC19A1P41440 591 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 MAPK9P45984 424 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 GFERP55789 205 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 KIF5AQ12840 1032 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 MPP3Q13368 585 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 SPARCL1Q14515 664 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 INSCQ1MX18 579 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 ANKRD20A3Q5VUR7 823 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 PDPK2PQ6A1A2 396 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 INO80CQ6PI98 192 aaPredicted RBP17.54■□□□□ 0.4
SMG1-203ENST00000532700 FAM83HQ6ZRV2 1179 aaPredicted RBP17.54■□□□□ 0.4
SMG1-203ENST00000532700 GLT6D1Q7Z4J2 308 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 DTX1Q86Y01 620 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 BMPERQ8N8U9 685 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 RASGEF1AQ8N9B8 481 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 VAT1Q99536 393 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 SLC38A3Q99624 504 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 PDP2Q9P2J9 529 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 CPNE7Q9UBL6 633 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMG1-203ENST00000532700 CAPN6Q9Y6Q1 641 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 ATRXP46100 2492 aa17.54■□□□□ 0.4
SMG1-203ENST00000532700 CCDC66A2RUB6 948 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 CCL22O00626 93 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 KCNN4O15554 427 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 CDK14O94921 469 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 CLCNKAP51800 687 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 COPS2P61201 443 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 LY6DQ14210 128 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 DENND5AQ6IQ26 1287 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 TMEM71Q6P5X7 295 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 RANBP10Q6VN20 620 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 LRRTM4Q86VH4 590 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 LRRC8AQ8IWT6 810 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 ART4Q93070 314 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 KLHL3Q9UH77 587 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 TRHDEQ9UKU6 1024 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 B3GALT1Q9Y5Z6 326 aa17.53■□□□□ 0.4
SMG1-203ENST00000532700 HGSO14964 777 aaPredicted RBP17.52■□□□□ 0.4
SMG1-203ENST00000532700 LIPCP11150 499 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 HLA-DPA1P20036 260 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 SPAM1P38567 509 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 UCNP55089 124 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 GDF10P55107 478 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 RWDD2BP57060 319 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 GPLD1P80108 840 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 TMEM115Q12893 351 aaPredicted RBP17.52■□□□□ 0.4
SMG1-203ENST00000532700 CLCA4Q14CN2 919 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 GPRC6AQ5T6X5 926 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 CCDC181Q5TID7 509 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 CCDC70Q6NSX1 233 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 CCDC81Q6ZN84 652 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 ARHGAP22Q7Z5H3 698 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 BEND7Q8N7W2 519 aaPredicted RBP17.52■□□□□ 0.4
SMG1-203ENST00000532700 GPR150Q8NGU9 434 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 NCSTNQ92542 709 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 TMEM159Q96B96 161 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 CCNL2Q96S94 520 aaPredicted RBP17.52■□□□□ 0.4
SMG1-203ENST00000532700 CTRCQ99895 268 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 APMAPQ9HDC9 416 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 RAD18Q9NS91 495 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 FKBPLQ9UIM3 349 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 EFR3BQ9Y2G0 817 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 BAHCC1Q9P281 2608 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 AHCTF1Q8WYP5 2266 aa17.52■□□□□ 0.4
SMG1-203ENST00000532700 KALRNO60229 2985 aa17.52■□□□□ 0.39
SMG1-203ENST00000532700 KIR2DS5A0A0G2JLQ3 304 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 A0A0G2JNG1 304 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 GLYATL1P3A0A0U1RQE8 302 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 OR2AG2A6NM03 316 aa17.51■□□□□ 0.39
SMG1-203ENST00000532700 EFCAB7A8K855 629 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms