RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 SLC30A1Q9Y6M5 507 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 RPS6KL1Q9Y6S9 549 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 SEC16AO15027 2179 aa9.09□□□□□ -0.95
CHMP4A-205ENST00000531158 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 SNRNP200O75643 2136 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 MDC1Q14676 2089 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PIKFYVEQ9Y2I7 2098 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 NF1P21359 2839 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 DDX3XO00571 662 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 POLR1CO15160 346 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 KIF1CO43896 1103 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PRPSAP2O60256 369 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 CLDN7O95471 211 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 RARAP10276 462 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 F3P13726 295 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 MCM3P25205 808 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 GRNP28799 593 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 DLSTP36957 453 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 LEPRP48357 1165 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 CDH6P55285 790 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 DSC2Q02487 901 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PEX6Q13608 980 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 LAMB3Q13751 1172 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 MAP7Q14244 749 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ERV3-1Q14264 604 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 RALGPS1Q5JS13 557 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF648Q5T619 568 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 HENMT1Q5T8I9 393 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 FHL5Q5TD97 284 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PAPD7Q5XG87 772 aaKnown RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 TCTN3Q6NUS6 607 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 KDELC2Q7Z4H8 507 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 KIAA1328Q86T90 577 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 LZTR1Q8N653 840 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ESX1Q8N693 406 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 GALNT6Q8NCL4 622 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 EXD1Q8NHP7 514 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ARRDC2Q8TBH0 407 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 SSC4DQ8WTU2 575 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 SYN2Q92777 582 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 C9orf72Q96LT7 481 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ZPBPQ9BS86 351 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ULBP3Q9BZM4 244 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 AKIRIN1Q9H9L7 192 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PCDH18Q9HCL0 1135 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 NT5MQ9NPB1 228 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 PRDM8Q9NQV8 689 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF624Q9P2J8 865 aaPredicted RBP9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC23A2Q9UGH3 650 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNHIT2Q9UHR6 403 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 TLK1Q9UKI8 766 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 MYO6Q9UM54 1294 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 KCTD3Q9Y597 815 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 OTOGQ6ZRI0 2925 aa9.08□□□□□ -0.96
CHMP4A-205ENST00000531158 A0A0U1RQJ8 604 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 SSU72P8A0A1W2PR75 194 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 LILRA5A6NI73 299 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 H3BRJ5 948 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 MFSD11O43934 449 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 SNX2O60749 519 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 SEMA7AO75326 666 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 RNF8O76064 485 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ASMTLO95671 621 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 MMP2P08253 660 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CD48P09326 243 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 BRAFP15056 766 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 FERP16591 822 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF30P17039 623 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 GNLYP22749 145 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 PCK1P35558 622 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 PPP1CAP62136 330 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 SLC25A11Q02978 314 aaKnown RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 NIPAL4Q0D2K0 466 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 MMRN1Q13201 1228 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CCDC122Q5T0U0 273 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 MARC1Q5VT66 337 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CAPRIN2Q6IMN6 1127 aaKnown RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 WDR93Q6P2C0 686 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ASB18Q6ZVZ8 466 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 LYSMD3Q7Z3D4 306 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ZNF571Q7Z3V5 609 aaPredicted RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ZC3H18Q86VM9 953 aaKnown RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 CPNE8Q86YQ8 564 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ATPAF2Q8N5M1 289 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 TRIM58Q8NG06 486 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 MAML1Q92585 1016 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 HSPH1Q92598 858 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 RSC1A1Q92681 617 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 ELMO2Q96JJ3 720 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 PCMTD1Q96MG8 357 aaPredicted RBP9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 OR6C1Q96RD1 312 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 LYSMD1Q96S90 227 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 EFHD1Q9BUP0 239 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 PARD6BQ9BYG5 372 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 BRD8Q9H0E9 1235 aa9.07□□□□□ -0.96
CHMP4A-205ENST00000531158 TRIT1Q9H3H1 467 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms