RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TRAPPC11Q7Z392 1133 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 DEFB128Q7Z7B8 93 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 SERINC5Q86VE9 423 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 TMTC2Q8N394 836 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 LRRC57Q8N9N7 239 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 NFKBIDQ8NI38 313 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 SNAPC3Q92966 411 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 NLRP4Q96MN2 994 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 INPP4AQ96PE3 977 aaPredicted RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 C1QTNF1Q9BXJ1 281 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 KRTAP1-5Q9BYS1 174 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 FTOQ9C0B1 505 aaKnown RBP eCLIP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 WDR6Q9NNW5 1121 aaKnown RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 BCCIPQ9P287 314 aaKnown RBP eCLIP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 HSPB7Q9UBY9 170 aa4.9□□□□□ -1.63
CSDE1-212ENST00000529046 DDX49Q9Y6V7 483 aaKnown RBP4.9□□□□□ -1.63
CSDE1-212ENST00000529046 ERICH2A1L162 156 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 SOX30O94993 753 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 CLDN7O95471 211 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 CBX6O95503 412 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 HEXAP06865 529 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 POLR2MP0CAP2 368 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 HOXB2P14652 356 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 EPHA8P29322 1005 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 CCND2P30279 289 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 EFNA5P52803 228 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 EFNB1P98172 346 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 HSDL1Q3SXM5 330 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 DAB2IPQ5VWQ8 1189 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 SEPT14Q6ZU15 432 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 CAMK1DQ8IU85 385 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 FAM217AQ8IXS0 508 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 GHDCQ8N2G8 530 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 TEX19Q8NA77 164 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 C11orf65Q8NCR3 313 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 NCOA7Q8NI08 942 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 GABPB2Q8TAK5 448 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 APBB2Q92870 758 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 URB1-AS1Q96HZ7 61 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 NR1H4Q96RI1 486 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 TGS1Q96RS0 853 aaKnown RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 LZTS2Q9BRK4 669 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 C16orf70Q9BSU1 422 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 BRF2Q9HAW0 419 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 SIRT3Q9NTG7 399 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 PLEKHB1Q9UF11 243 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-212ENST00000529046 NAALADL1Q9UQQ1 740 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 COL4A6Q14031 1691 aa4.89□□□□□ -1.63
CSDE1-212ENST00000529046 XIRP2A4UGR9 3374 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 REV3LO60673 3130 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 IGKV2D-30A0A075B6S6 120 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 A0A096LPK6 155 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 ARHGAP10A1A4S6 786 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 EPOPA6NHQ4 379 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 RSPH10B2B2RC85 870 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 FIBPO43427 364 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CYTH3O43739 400 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 SYF2O95926 243 aaKnown RBP4.88□□□□□ -1.63
CSDE1-212ENST00000529046 ALPLP05186 524 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 RSPH10BP0C881 870 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 ATP1A3P13637 1013 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MYOGP15173 224 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 PTPN2P17706 415 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 UBA1P22314 1058 aaKnown RBP4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CHMLP26374 656 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CCKARP32238 428 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 ELF1P32519 619 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 KIF5BP33176 963 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 GGT5P36269 586 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 GNAQP50148 359 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 KRTAP10-9P60411 292 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 RPP30P78346 268 aaKnown RBP4.88□□□□□ -1.63
CSDE1-212ENST00000529046 FAM27E3Q08E93 113 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 ATG9BQ674R7 924 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 TMEM81Q6P7N7 255 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 METTL7BQ6UX53 244 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 SLC16A12Q6ZSM3 486 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CADM3Q8N126 398 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 TOP1MTQ969P6 601 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 SLC25A28Q96A46 364 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MPP4Q96JB8 637 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CDHR1Q96JP9 859 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 SPATA33Q96N06 139 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MSTO1Q9BUK6 570 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 SPZ1Q9BXG8 430 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CPVLQ9H3G5 476 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MVB12BQ9H7P6 319 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 KCND2Q9NZV8 630 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MPP6Q9NZW5 540 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 PEMTQ9UBM1 199 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 CDH22Q9UJ99 828 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 RAP2CQ9Y3L5 183 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 NRCAMQ92823 1304 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 TTC28Q96AY4 2481 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 LAMA4Q16363 1823 aa4.88□□□□□ -1.63
CSDE1-212ENST00000529046 MBLAC1A4D2B0 266 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-212ENST00000529046 LINC01553A4QN01 128 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 E7EWF7 191 aa4.87□□□□□ -1.63
CSDE1-212ENST00000529046 C5orf67F2Z3F1 127 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms