RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CCDC137Q6PK04 289 aaKnown RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 TTC7BQ86TV6 843 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 SLC34A3Q8N130 599 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 BBS5Q8N3I7 341 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 SPATA4Q8NEY3 305 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 JPH3Q8WXH2 748 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ASB12Q8WXK4 309 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 SLCO2A1Q92959 643 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 FUBP1Q96AE4 644 aaKnown RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 MCCC1Q96RQ3 725 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 C1QTNF2Q9BXJ5 285 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ATP13A3Q9H7F0 1226 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ETNK1Q9HBU6 452 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 HOMER3Q9NSC5 361 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 KLHL8Q9P2G9 620 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 PCYOX1Q9UHG3 505 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 PNMA8BQ9ULN7 279 aaPredicted RBP10.85□□□□□ -0.67
NEDD8-204ENST00000526430 ITM2BQ9Y287 266 aa10.85□□□□□ -0.67
NEDD8-204ENST00000526430 TCRBV7S3A2A0A539 114 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 EFCAB7A8K855 629 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 HGSO14964 777 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 AP1G1O43747 822 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 EPOP01588 193 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 ALPIP09923 528 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 LHCGRP22888 699 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 SERPINA4P29622 427 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 GRIA1P42261 906 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 NEK3P51956 506 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 THOP1P52888 689 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 WNT3AP56704 352 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 RAD51Q06609 339 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 SPARCL1Q14515 664 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 C16orf72Q14CZ0 275 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 ELOCQ15369 112 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 TRIP13Q15645 432 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 TMEM52BQ4KMG9 183 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 FAXCQ5TGI0 409 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 BRAT1Q6PJG6 821 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 TAB3Q8N5C8 712 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 SCRN2Q96FV2 425 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 PPP1R16AQ96I34 528 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 FEM1CQ96JP0 617 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 TAAR9Q96RI9 348 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 NAP1L3Q99457 506 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 PCDH9Q9HC56 1237 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 PCDH12Q9NPG4 1184 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 AKAP7Q9P0M2 348 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-204ENST00000526430 GULP1Q9UBP9 304 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 FAM153AQ9UHL3 310 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 RSPH14Q9UHP6 348 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 PHTF1Q9UMS5 762 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 TTLL3Q9Y4R7 772 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 MRFAP1Q9Y605 127 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 RNF215Q9Y6U7 377 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 CCDC168Q8NDH2 2452 aa10.84□□□□□ -0.67
NEDD8-204ENST00000526430 AKAP9Q99996 3911 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 A0A0J9YYE9 177 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 NPIPB15A6NHN6 443 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ESPNB1AK53 854 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ANKRD66B4E2M5 251 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-204ENST00000526430 TOR1BO14657 336 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 NKX2-8O15522 239 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 PMPCBO75439 489 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 URI1O94763 535 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-204ENST00000526430 TRBC1P01850 177 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 KRT14P02533 472 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 CTPS1P17812 591 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 MAGEA6P43360 314 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 FNTAP49354 379 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 BLKP51451 505 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 YPEL5P62699 121 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 MRPS25P82663 173 aaKnown RBP10.83□□□□□ -0.68
NEDD8-204ENST00000526430 CDK18Q07002 472 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 MPP3Q13368 585 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 SEMA5AQ13591 1074 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 SIRPB2Q5JXA9 342 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ARMC12Q5T9G4 340 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 LIPIQ6XZB0 460 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 MACC1Q6ZN28 852 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 RFLNAQ6ZTI6 216 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ZNF534Q76KX8 674 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 TIPARPQ7Z3E1 657 aaKnown RBP10.83□□□□□ -0.68
NEDD8-204ENST00000526430 TMPRSS9Q7Z410 1059 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 SPRED1Q7Z699 444 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 TSPAN33Q86UF1 283 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 CACNA2D3Q8IZS8 1091 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 CPT1CQ8TCG5 803 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ZNF592Q92610 1267 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 LYSMD1Q96S90 227 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 EFHD1Q9BUP0 239 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 DDA1Q9BW61 102 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 ARNT2Q9HBZ2 717 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 B4GALT6Q9UBX8 382 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 DOLKQ9UPQ8 538 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 SPO11Q9Y5K1 396 aa10.83□□□□□ -0.68
NEDD8-204ENST00000526430 SPG11Q96JI7 2443 aa10.82□□□□□ -0.68
NEDD8-204ENST00000526430 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms