RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 SEMA5BQ9P283 1151 aa11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 ATXN10Q9UBB4 475 aa11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 SRPK3Q9UPE1 567 aa11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 FARSAQ9Y285 508 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 ADGRG1Q9Y653 693 aa11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 APCP25054 2843 aa11.27□□□□□ -0.61
TRAPPC9-203ENST00000517667 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TMEM63AO94886 807 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 CBX6O95503 412 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF8P17098 575 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 PTGIRP43119 386 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 RRADP55042 308 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ELOAQ14241 798 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 GPR18Q14330 331 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 NAA30Q147X3 362 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TDRD12Q587J7 1177 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ANKRD20A8PQ5CZ79 823 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF569Q5MCW4 686 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 PLEKHA7Q6IQ23 1121 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 FAM199XQ6PEV8 388 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 KLHL35Q6PF15 583 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 KMT5CQ86Y97 462 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TEX26Q8N6G2 289 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TMEM102Q8N9M5 508 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 NEK11Q8NG66 645 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF514Q96K75 400 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 SMIM14Q96QK8 99 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 WDR24Q96S15 920 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 RUFY1Q96T51 708 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TIMM29Q9BSF4 260 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ANP32EQ9BTT0 268 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 OR2AG1Q9H205 316 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TRIM39Q9HCM9 518 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 SCHIP1Q9P0W5 487 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 LUZP4Q9P127 313 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF624Q9P2J8 865 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 AMACRQ9UHK6 382 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 SIK3Q9Y2K2 1263 aa11.26□□□□□ -0.61
TRAPPC9-203ENST00000517667 TMEM191CA6NGB0 347 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 CHUKO15111 745 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 KMOO15229 486 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SCRG1O75711 98 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SLC25A14O95258 325 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 JCHAINP01591 159 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 FOLR1P15328 257 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 VCLP18206 1134 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 POU3F2P20265 443 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ARL4DP49703 201 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 GSDMDP57764 484 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 UBE2HP62256 183 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SEPT7Q16181 437 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 AGAP9Q5VTM2 703 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 PDPK2PQ6A1A2 396 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ABRAXAS1Q6UWZ7 409 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 WASH2PQ6VEQ5 465 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF517Q6ZMY9 492 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 MED25Q71SY5 747 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 POLNQ7Z5Q5 900 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 LRRTM4Q86VH4 590 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SRRM1Q8IYB3 904 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 FDCSPQ8NFU4 85 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 OR8K5Q8NH50 307 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ADAMTS17Q8TE56 1095 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 MR1Q95460 341 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 CXorf40BQ96DE9 158 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SMAD5Q99717 465 aaKnown RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZSCAN5AQ9BUG6 496 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 NUDT9Q9BW91 350 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 AKIRIN1Q9H9L7 192 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 FGF21Q9NSA1 209 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 ETNK2Q9NVF9 386 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 C5AR2Q9P296 337 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 SNX7Q9UNH6 387 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 CHKBQ9Y259 395 aa11.25□□□□□ -0.61
TRAPPC9-203ENST00000517667 IGHV5-51A0A0C4DH38 117 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 ANKUB1A6NFN9 424 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 ATMINO43313 823 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 HNRNPRO43390 633 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 VEGFDO43915 354 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 KLK3P07288 261 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 RAB40ALP0C0E4 278 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 EBLN1P0CF75 366 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 FERP16591 822 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF7P17097 686 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 IDSP22304 550 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 AMPD1P23109 780 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 PCK1P35558 622 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 HALP42357 657 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 ZNF165P49910 485 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 VAV2P52735 878 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 ITGA1P56199 1179 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 TUBB4BP68371 445 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 HSD11B2P80365 405 aa11.24□□□□□ -0.61
TRAPPC9-203ENST00000517667 TUBB2AQ13885 445 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms