RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 CACNG1Q06432 222 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 SGCGQ13326 291 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 CPSF6Q16630 551 aaKnown RBP eCLIP9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 SEL1L3Q68CR1 1132 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 MYO1HQ8N1T3 1032 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 PHC3Q8NDX5 983 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 CXorf40AQ8TE69 158 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 JPH3Q8WXH2 748 aaPredicted RBP9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 CENPTQ96BT3 561 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 TUBGCP3Q96CW5 907 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 NRTNQ99748 197 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 P2RY13Q9BPV8 354 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 WASF2Q9Y6W5 498 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 GVINP1Q7Z2Y8 2422 aa9.66□□□□□ -0.86
EFCAB13-203ENST00000517484 B2RBV5 119 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 PENKP01210 267 aaPredicted RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 SLC9B1Q4ZJI4 515 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 TEX9Q8N6V9 391 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 OR52B2Q96RD2 323 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 AARSD1Q9BTE6 412 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 HGH1Q9BTY7 390 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 C1orf50Q9BV19 199 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 PLAGL1Q9UM63 463 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 A8MT66 165 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 PDZK1P1A8MUH7 402 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 PRR5-ARHGAP8B1AHC4 643 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 CACNG3O60359 315 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 HOXB2P14652 356 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 PRDX3P30048 256 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 HNF4AP41235 474 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 LEPRP48357 1165 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 CLDN2P57739 230 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 ARHGAP8P85298 464 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 CRY1Q16526 586 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 CCDC153Q494R4 210 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 MMEL1Q495T6 779 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 AARS2Q5JTZ9 985 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 MPP7Q5T2T1 576 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 ADCK2Q7Z695 626 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 MAPK15Q8TD08 544 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 UHRF1Q96T88 793 aaPredicted RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 MKRN2Q9H000 416 aaKnown RBP9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 MIR1-1HGQ9H1L0 117 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 SYTL2Q9HCH5 934 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 SERGEFQ9UGK8 458 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 IKZF3Q9UKT9 509 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 HS3ST2Q9Y278 367 aa9.65□□□□□ -0.86
EFCAB13-203ENST00000517484 LAMA1P25391 3075 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 TMEM202A6NGA9 273 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 EIF4E1BA6NMX2 242 aaKnown RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 A8MUI8 341 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 CFAP99D6REC4 459 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 GYG2O15488 501 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 ECI2O75521 394 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 HIST1H2AGP0C0S8 130 aaPredicted RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 TPBGLP0DKB5 382 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 HIST1H2ADP20671 130 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 SCTRP47872 440 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 RGS4P49798 205 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 KPNA2P52292 529 aaKnown RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 CUL3Q13618 768 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 LAMB3Q13751 1172 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 PPP1R3AQ16821 1122 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 ZNF805Q5CZA5 627 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 ATG14Q6ZNE5 492 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 RBFAQ8N0V3 343 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 SH3KBP1Q96B97 665 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 CLPTM1LQ96KA5 538 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 HIST1H2AHQ96KK5 128 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 HIST1H2AJQ99878 128 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 MRPL57Q9BQC6 102 aaKnown RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 H2AFJQ9BTM1 129 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 TTYH1Q9H313 450 aaPredicted RBP9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 ARL8BQ9NVJ2 186 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 CCDC167Q9P0B6 97 aa9.65□□□□□ -0.87
EFCAB13-203ENST00000517484 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 ZNF189O75820 626 aaPredicted RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 RBP1P09455 135 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 CYP2A6P11509 494 aaPredicted RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 ENO3P13929 434 aaPredicted RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 ZNF37AP17032 561 aaPredicted RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 MAPK8P45983 427 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 CTSCP53634 463 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 E2F5Q15329 346 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 KHDC1Q4VXA5 237 aaKnown RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 PDE12Q6L8Q7 609 aaKnown RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 SYTL1Q8IYJ3 562 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 LPGAT1Q92604 370 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 GFM2Q969S9 779 aaKnown RBP9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 ARRDC3Q96B67 414 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 TMEM159Q96B96 161 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 FAM83CQ9BQN1 747 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 MAGEE1Q9HCI5 957 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 GDE1Q9NZC3 331 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 GPSM3Q9Y4H4 160 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 KNTC1P50748 2209 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 CAPN8A6NHC0 703 aa9.64□□□□□ -0.87
EFCAB13-203ENST00000517484 G3V2L1 256 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms