RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DPP6P42658 865 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 SLC1A2P43004 574 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PPARDQ03181 441 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CUL1Q13616 776 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PTK2BQ14289 1009 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PRRT3Q5FWE3 981 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PDPK2PQ6A1A2 396 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 ZNF470Q6ECI4 717 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 NEPROQ6NW34 567 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 TMEM220Q6QAJ8 160 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 RABEPKQ7Z6M1 372 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 ZNF547Q8IVP9 402 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 PALM2Q8IXS6 379 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 DDHD1Q8NEL9 900 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 LKAAEAR1Q8TD35 194 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 LMX1AQ8TE12 382 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 UBXN4Q92575 508 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 FAM136AQ96C01 138 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CERS2Q96G23 380 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 ELF4Q99607 663 aaPredicted RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 LRRC61Q9BV99 259 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CLPBQ9H078 707 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 CDC42EP4Q9H3Q1 356 aaKnown RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 LRRC4CQ9HCJ2 640 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 SMOXQ9NWM0 555 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 ZDHHC3Q9NYG2 299 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 MTRF1LQ9UGC7 380 aaKnown RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 APOBEC3BQ9UH17 382 aaKnown RBP11.19□□□□□ -0.62
HTT-213ENST00000513806 ANKRD12Q6UB98 2062 aa11.19□□□□□ -0.62
HTT-213ENST00000513806 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 A0A1B0GTQ1 180 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 UBA6A0AVT1 1052 aaPredicted RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 C4orf47A7E2U8 309 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 IQCF5A8MTL0 148 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 EIF3HO15372 352 aaKnown RBP eCLIP11.18□□□□□ -0.62
HTT-213ENST00000513806 FFAR2O15552 330 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 GRID2O43424 1007 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 NUAK1O60285 661 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 MAGEC1O60732 1142 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 PIAS2O75928 621 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 ACSL3O95573 720 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 TNFP01375 233 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 CSF2P04141 144 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 SYPP08247 313 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 ACP5P13686 325 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 NME1P15531 152 aaKnown RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 HK3P52790 923 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 PGGT1BP53609 377 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 OVGP1Q12889 678 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 THOC5Q13769 683 aaKnown RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 GPR33Q49SQ1 333 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 PYCR3Q53H96 274 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 LDLRAP1Q5SW96 308 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 CHST15Q7LFX5 561 aaPredicted RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 DCP2Q8IU60 420 aaKnown RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 GALNT13Q8IUC8 556 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 TRAPPC5Q8IUR0 188 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 KRT222Q8N1A0 295 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 LILRA3Q8N6C8 439 aaPredicted RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 GSDMBQ8TAX9 411 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 FAM174AQ8TBP5 190 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 PEX13Q92968 403 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 SKA1Q96BD8 255 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 ULK4Q96C45 1275 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 MRRFQ96E11 262 aaKnown RBP11.18□□□□□ -0.62
HTT-213ENST00000513806 COPS8Q99627 209 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 VPS37BQ9H9H4 285 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 KCNK6Q9Y257 313 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 BTBD3Q9Y2F9 522 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 CRYL1Q9Y2S2 319 aa11.18□□□□□ -0.62
HTT-213ENST00000513806 IGLV3-16A0A075B6K0 115 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 TCRBV9S1A1TA0A576 114 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 TOR1BO14657 336 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 FAM155BO75949 473 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 HAUS5O94927 633 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CER1O95813 267 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 EML2O95834 649 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 C1QAP02745 245 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 IVLP07476 585 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CTSEP14091 401 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 ATP1B2P14415 290 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 KELP23276 732 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 DGKAP23743 735 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 GABRB3P28472 473 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 EPHA8P29322 1005 aaPredicted RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 PMLP29590 882 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 FMO4P31512 558 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CSE1LP55060 971 aaKnown RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 EIF3BP55884 814 aaKnown RBP11.17□□□□□ -0.62
HTT-213ENST00000513806 CTBSQ01459 385 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CBLBQ13191 982 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 GTF2H3Q13889 308 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 BRD3Q15059 726 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
HTT-213ENST00000513806 CTSL3PQ5NE16 218 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms