RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 SLC19A1P41440 591 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 ARL4DP49703 201 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 CASP6P55212 293 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 SNX16P57768 344 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 HSD11B2P80365 405 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 ABRQ12979 859 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 SSPNQ14714 243 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 PARP15Q460N3 678 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 CLEC9AQ6UXN8 241 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 TSEN2Q8NCE0 465 aaKnown RBP10.56□□□□□ -0.72
SNF8-207ENST00000509995 EPS8L1Q8TE68 723 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 CLIP3Q96DZ5 547 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 DHRS4Q9BTZ2 278 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 ATP13A2Q9NQ11 1180 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 ZNF624Q9P2J8 865 aaPredicted RBP10.56□□□□□ -0.72
SNF8-207ENST00000509995 ARMCX3Q9UH62 379 aaPredicted RBP10.56□□□□□ -0.72
SNF8-207ENST00000509995 CD84Q9UIB8 345 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 HCFC1P51610 2035 aa10.56□□□□□ -0.72
SNF8-207ENST00000509995 K7ELQ4 463 aaPredicted RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 ATP1A1P05023 1023 aaKnown RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 IGFBP2P18065 325 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 ADSLP30566 484 aaPredicted RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 ADRA1BP35368 520 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 YBEYP58557 167 aaPredicted RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 AIMP2Q13155 320 aaKnown RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 GPR18Q14330 331 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 INAQ16352 499 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 PTCHD3Q3KNS1 767 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 AGAP7PQ5VUJ5 663 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 RESP18Q5W5W9 173 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 TECPR1Q7Z6L1 1165 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 RTL3Q8N8U3 475 aaKnown RBP10.55□□□□□ -0.72
SNF8-207ENST00000509995 ADAMTS18Q8TE60 1221 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 SNX21Q969T3 373 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 AP2M1Q96CW1 435 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 C18orf12Q96KH6 178 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 CFAP57Q96MR6 1250 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 AGAP4Q96P64 663 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 MAP3K3Q99759 626 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 ABCG8Q9H221 673 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 OSGEPL1Q9H4B0 414 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 EPS8L2Q9H6S3 715 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 POT1Q9NUX5 634 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 TINAGQ9UJW2 476 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 PCDHGC4Q9Y5F7 938 aa10.55□□□□□ -0.72
SNF8-207ENST00000509995 TLCD2A6NGC4 264 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 NPIPB15A6NHN6 443 aaPredicted RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 WASH4PA8MWX3 477 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 ATMINO43313 823 aaPredicted RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 SLC19A2O60779 497 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 YEATS4O95619 227 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 PYGLP06737 847 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 INHBBP09529 407 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 CYP2A6P11509 494 aaPredicted RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 SCNN1AP37088 669 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 CLCNKAP51800 687 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 RBPJQ06330 500 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 RABEP1Q15276 862 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 CYP2A13Q16696 494 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 FAM102AQ5T9C2 384 aaPredicted RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 RFLNAQ6ZTI6 216 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 PPP1R32Q7Z5V6 425 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 TSPAN33Q86UF1 283 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 AOPEPQ8N6M6 819 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 EXD1Q8NHP7 514 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 SCAMP4Q969E2 229 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 CCDC47Q96A33 483 aaKnown RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 NSMCE3Q96MG7 304 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 ALPK1Q96QP1 1244 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 AGAP2Q99490 1192 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 DPH2Q9BQC3 489 aaPredicted RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 MAGEB5Q9BZ81 275 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 RMI1Q9H9A7 625 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 UPF2Q9HAU5 1272 aaKnown RBP10.54□□□□□ -0.72
SNF8-207ENST00000509995 GPAMQ9HCL2 828 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 SLC40A1Q9NP59 571 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 SEC14L3Q9UDX4 400 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 SIK3Q9Y2K2 1263 aa10.54□□□□□ -0.72
SNF8-207ENST00000509995 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 J3KR12 359 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 CPP00450 1065 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 SYT1P21579 422 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 FOLR3P41439 243 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 AP1S1P61966 158 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 YBX1P67809 324 aaKnown RBP10.53□□□□□ -0.72
SNF8-207ENST00000509995 GTF3C1Q12789 2109 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 CETN1Q12798 172 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 DSG2Q14126 1118 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 PCOLCEQ15113 449 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 C3AR1Q16581 482 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 RAB6CQ53S08 254 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 DNTTIP2Q5QJE6 756 aaKnown RBP10.53□□□□□ -0.72
SNF8-207ENST00000509995 RBM12BQ8IXT5 1001 aaKnown RBP10.53□□□□□ -0.72
SNF8-207ENST00000509995 TTC30BQ8N4P2 665 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 OR1N1Q8NGS0 311 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 CD180Q99467 661 aa10.53□□□□□ -0.72
SNF8-207ENST00000509995 NDC1Q9BTX1 674 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms