RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 AGAP14A8MT82 685 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 TGFB1I1O43294 461 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 PLRG1O43660 514 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 KLK8O60259 260 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 RB1P06400 928 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 HEXAP06865 529 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 NR2F1P10589 423 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 DDX5P17844 614 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 CDH2P19022 906 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 ITGAXP20702 1163 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 EEF1DP29692 281 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 ALDH4A1P30038 563 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 AIMP2Q13155 320 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 EFNB3Q15768 340 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 KRT24Q2M2I5 525 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 MMEL1Q495T6 779 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 C1orf141Q5JVX7 400 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 LCE3AQ5TA76 89 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 ARHGAP11AQ6P4F7 1023 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 TSSK4Q6SA08 328 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 LINGO2Q7L985 606 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 GALNT13Q8IUC8 556 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 POC5Q8NA72 575 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 H2AFJQ9BTM1 129 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 PDE7BQ9NP56 450 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 HAO1Q9UJM8 370 aa4.12□□□□□ -1.75
TRAPPC13-209ENST00000508304 GOLGA6L9A6NEM1 432 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SH2B2O14492 632 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 CTDSP2O14595 271 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 IPO7O95373 1038 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 ADRB2P07550 413 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 TM4SF1P30408 202 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 GNL1P36915 607 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 MATR3P43243 847 aaKnown RBP eCLIP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 CAPZA2P47755 286 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 GABRB2P47870 512 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SEC61BP60468 96 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 PLIN5Q00G26 463 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 NTRK2Q16620 822 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 HECTD3Q5T447 861 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 RPUSD3Q6P087 351 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 GALNTL5Q7Z4T8 443 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 ARHGAP12Q8IWW6 846 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 TTC30BQ8N4P2 665 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 METTL27Q8N6F8 245 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SPATA22Q8NHS9 363 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 PERPQ96FX8 193 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 F2RL3Q96RI0 385 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 LITAFQ99732 161 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SH3GL2Q99962 352 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 ADPGKQ9BRR6 497 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 OR10A4Q9H209 315 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 C20orf141Q9NUB4 165 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 MCM9Q9NXL9 1143 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 DLGAP2Q9P1A6 1054 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 SUCLA2Q9P2R7 463 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 KCNS2Q9ULS6 477 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 PPIEQ9UNP9 301 aaKnown RBP4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 FAM169AQ9Y6X4 670 aa4.11□□□□□ -1.75
TRAPPC13-209ENST00000508304 A0A1W2PS18 150 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 FRMD3A2A2Y4 597 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 TMEM202A6NGA9 273 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 MID1O15344 667 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 SEC31AO94979 1220 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 TFP02787 698 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 GLULP15104 373 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 TMEM11P17152 192 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 IL11P20809 199 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 AGAP20933 346 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 OAS2P29728 719 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 GARSP41250 739 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 PIK3CAP42336 1068 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 NRIP1P48552 1158 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 HSD17B4P51659 736 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 CLCNKAP51800 687 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 NIPAL4Q0D2K0 466 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 CSTF3Q12996 717 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 PPIGQ13427 754 aaKnown RBP eCLIP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 RAB41Q5JT25 222 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 PAPPA-AS1Q5QFB9 102 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 METTL2BQ6P1Q9 378 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 TAOK1Q7L7X3 1001 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 SH2D6Q7Z4S9 175 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 DSG4Q86SJ6 1040 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 IQCA1Q86XH1 822 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 NKAIN3Q8N8D7 197 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 MCUQ8NE86 351 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 ZKSCAN4Q969J2 545 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 CDCA5Q96FF9 252 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 METTL2AQ96IZ6 378 aaKnown RBP4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 MAP7D2Q96T17 732 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 PYGO2Q9BRQ0 406 aa4.1□□□□□ -1.75
TRAPPC13-209ENST00000508304 MOV10L1Q9BXT6 1211 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms