RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 GLUD1P00367 558 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 CST1P01037 141 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 ASLP04424 464 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 MBL2P11226 248 aaPredicted RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 FSHRP23945 695 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 FMO3P31513 532 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 RAD23AP54725 363 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 DCTN2Q13561 401 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 NEK10Q6ZWH5 1172 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 RTL3Q8N8U3 475 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 ATP6V0D2Q8N8Y2 350 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 OR13J1Q8NGT2 312 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 DPF3Q92784 378 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 MAGED4Q96JG8 741 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 KIFC1Q9BW19 673 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 CLK4Q9HAZ1 481 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 IGSF5Q9NSI5 407 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 GDAP2Q9NXN4 497 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 PRPF19Q9UMS4 504 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 ATP6V1G1O75348 118 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 STAU1O95793 577 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 C1RP00736 705 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 CCNCP24863 283 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 HALP42357 657 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 SELPLGQ14242 412 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 LPIN1Q14693 890 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 UPP1Q16831 310 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TECRLQ5HYJ1 363 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TIGD7Q6NT04 549 aaPredicted RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 ZC3H7AQ8IWR0 971 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 MICU2Q8IYU8 434 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 CATSPER1Q8NEC5 780 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 STAG3L4Q8TBR4 150 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TCF12Q99081 682 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 VAT1Q99536 393 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 IPPKQ9H8X2 491 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 TRNAU1APQ9NX07 287 aaKnown RBP9.51□□□□□ -0.89
PHF3-208ENST00000506783 KIF17Q9P2E2 1029 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 RIMS3Q9UJD0 308 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 ANAPC2Q9UJX6 822 aa9.51□□□□□ -0.89
PHF3-208ENST00000506783 SLCO1B7G3V0H7 640 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 DFNA5O60443 496 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 PRAMEF12O95522 483 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 OPN1SWP03999 348 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 COL6A1P12109 1028 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 MTHFRP42898 656 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 IDH2P48735 452 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 IL2P60568 153 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 PURAQ00577 322 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 RHDQ02161 417 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 IHHQ14623 411 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 SYT16Q17RD7 645 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 STXBP5Q5T5C0 1151 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 OGFRL1Q5TC84 451 aaPredicted RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 METTL21CQ5VZV1 264 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ZFP1Q6P2D0 407 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 FUNDC1Q8IVP5 155 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ATG16L2Q8NAA4 619 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ADCY4Q8NFM4 1077 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 DBF4BQ8NFT6 615 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 UTP15Q8TED0 518 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 OTULINQ96BN8 352 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 MTERF1Q99551 399 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 EXOSC4Q9NPD3 245 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 SH3BP4Q9P0V3 963 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 UBA2Q9UBT2 640 aaPredicted RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 IKZF3Q9UKT9 509 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 SNX8Q9Y5X2 465 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 SNX5Q9Y5X3 404 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 OR2AG2A6NM03 316 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 M0R129 80 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 KPNA5O15131 536 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 LDB2O43679 373 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 TMCC1O94876 653 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 S1PR4O95977 384 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 CYBBP04839 570 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ARCN1P48444 511 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 PMS2P3Q13401 168 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 DNASE1L3Q13609 305 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ZNF678Q5SXM1 525 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 TAF2Q6P1X5 1199 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 RAVER1Q8IY67 606 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 CLIP4Q8N3C7 705 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 CPSF7Q8N684 471 aaKnown RBP9.5□□□□□ -0.89
PHF3-208ENST00000506783 FAM86B1Q8N7N1 296 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 SNX19Q92543 992 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ASB9Q96DX5 294 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 APOLD1Q96LR9 279 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 FCRL5Q96RD9 977 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 C1QTNF1Q9BXJ1 281 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 CLPBQ9H078 707 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 PARVBQ9HBI1 364 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 CMTM6Q9NX76 183 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 NSMCE4AQ9NXX6 385 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ADGRE2Q9UHX3 823 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 ANKRD6Q9Y2G4 727 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 PRKAB1Q9Y478 270 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 PCDHB5Q9Y5E4 795 aa9.5□□□□□ -0.89
PHF3-208ENST00000506783 RAI2Q9Y5P3 530 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms