RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 TYRP1P17643 537 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 CAPZBP47756 277 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 SEPHS1P49903 392 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 SRSF1Q07955 248 aaKnown RBP eCLIP20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 NIPAL4Q0D2K0 466 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 GALNT3Q14435 633 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 AGAP9Q5VTM2 703 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 WASH2PQ6VEQ5 465 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 VSIG1Q86XK7 387 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 UBXN4Q92575 508 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 FAF2Q96CS3 445 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 DEF6Q9H4E7 631 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 WASH6PQ9NQA3 447 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 CROTQ9UKG9 612 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 MAN2B2Q9Y2E5 1009 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 DNAJC16Q9Y2G8 782 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 HEY1Q9Y5J3 304 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 KCNMB2Q9Y691 235 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 A0A087X0T9 212 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 KCNK1O00180 336 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 CHUKO15111 745 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 KIAA0754O94854 1291 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 FAM228BP0C875 321 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 ARSEP51690 589 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 UBASH3AP57075 661 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 ACY1Q03154 408 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 HGSNATQ68CP4 663 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 IRGCQ6NXR0 463 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 ABRAXAS1Q6UWZ7 409 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 TRAPPC5Q8IUR0 188 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 SIDT2Q8NBJ9 832 aaKnown RBP20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 GALNT6Q8NCL4 622 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 NAP1L5Q96NT1 182 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 VPS35Q96QK1 796 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 TWSG1Q9GZX9 223 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 RAB33BQ9H082 229 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 DTLQ9NZJ0 730 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 EPHA6Q9UF33 1036 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 RARRES3Q9UL19 164 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 CAPN11Q9UMQ6 739 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 ZNF711Q9Y462 761 aa20.7■□□□□ 0.9
SQSTM1-210ENST00000506042 TLN1Q9Y490 2541 aaKnown RBP20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 PIPSLA2A3N6 862 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 LRRD1A4D1F6 860 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 APOL1O14791 398 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 VPS4BO75351 444 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 FGF5P12034 268 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 GFERP55789 205 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 RPS15P62841 145 aaKnown RBP20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 GBE1Q04446 702 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 CDK18Q07002 472 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 ERV3-1Q14264 604 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 SEPT7Q16181 437 aaKnown RBP20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 PLA2G4EQ3MJ16 856 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 ASB18Q6ZVZ8 466 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 ADGRG6Q86SQ4 1221 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 KMT5CQ86Y97 462 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 CPLX3Q8WVH0 158 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 RNF157Q96PX1 679 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 SMIM14Q96QK8 99 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 WDR24Q96S15 920 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 GPR87Q9BY21 358 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 SLC25A51Q9H1U9 297 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 TRABDQ9H4I3 376 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 LRRC4CQ9HCJ2 640 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 ZNHIT6Q9NWK9 470 aaKnown RBP20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 VPS4AQ9UN37 437 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 SHOC2Q9UQ13 582 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 TP53TG5Q9Y2B4 290 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 PCDHGA6Q9Y5G7 932 aa20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.69■□□□□ 0.9
SQSTM1-210ENST00000506042 UBR5O95071 2799 aaPredicted RBP20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 KLHL33A6NCF5 533 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 MAP3K7O43318 606 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 CREG1O75629 220 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 TPM1P09493 284 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 KDELR1P24390 212 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 SLC19A1P41440 591 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 PLCL1Q15111 1095 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 PCSK7Q16549 785 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 ARMC6Q6NXE6 501 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 TMC3Q7Z5M5 1100 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 BEND7Q8N7W2 519 aaPredicted RBP20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 THAP4Q8WY91 577 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 IMP4Q96G21 291 aaKnown RBP20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 CD180Q99467 661 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 HACD3Q9P035 362 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 ADGRG1Q9Y653 693 aa20.68■□□□□ 0.9
SQSTM1-210ENST00000506042 CDC14CA4D256 554 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 GOLGA6L3A6NEY3 463 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 MTSS1O43312 755 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 SPAG6O75602 509 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 NDST3O95803 873 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 PMS2P54278 862 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 TUBB3Q13509 450 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 DNASE1L3Q13609 305 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 LDLRAP1Q5SW96 308 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 TMTC4Q5T4D3 741 aa20.67■□□□□ 0.9
SQSTM1-210ENST00000506042 GPR26Q8NDV2 337 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms