RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SERPINA9Q86WD7 417 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR156Q8NFN8 814 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 GIMAP7Q8NHV1 300 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 AARSD1Q9BTE6 412 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PARD6BQ9BYG5 372 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 LNP1A1A4G5 178 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 STX7O15400 261 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 GPR39O43194 453 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 HK3P52790 923 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PCDH1Q08174 1060 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 KIF19Q2TAC6 998 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCDC70Q6NSX1 233 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC22A15Q8IZD6 547 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 IQCKQ8N0W5 287 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC25A45Q8N413 288 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZFPM2Q8WW38 1151 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 KCNJ9Q92806 393 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SUDS3Q9H7L9 328 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 FZD3Q9NPG1 666 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PIH1D1Q9NWS0 290 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 NLGN3Q9NZ94 848 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZC3H7BQ9UGR2 993 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 NFU1Q9UMS0 254 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 STK25O00506 426 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ESR1P03372 595 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 THEGLP0DJG4 465 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PAMP19021 973 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 MCM3P25205 808 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC26A3P40879 764 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCNFP41002 786 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PLTPP55058 493 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 TMEM115Q12893 351 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 SGCGQ13326 291 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF789Q5FWF6 425 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 BEND6Q5SZJ8 279 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CYHR1Q6ZMK1 362 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 KDM7AQ6ZMT4 941 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 KCNMB4Q86W47 210 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 UNC5BQ8IZJ1 945 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 CALML6Q8TD86 181 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 ELF4Q99607 663 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 RBBP8Q99708 897 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 DPEP2Q9H4A9 486 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 PHPT1Q9NRX4 125 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 NOVA2Q9UNW9 492 aaKnown RBP8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
CDC42SE2-208ENST00000505065 DMXL1Q9Y485 3027 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR51F1A6NGY5 319 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 NOBOXO60393 691 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 NEBLO76041 1014 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 FSBPO95073 299 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PCDH8O95206 1070 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 AHSGP02765 367 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 TPBGLP0DKB5 382 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 STX2P32856 288 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 SKIV2L2P42285 1042 aaKnown RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 VPS41P49754 854 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 SESN2P58004 480 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 E2F2Q14209 437 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 HLTFQ14527 1009 aaKnown RBP eCLIP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM151BQ6UXP7 276 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCDC91Q7Z6B0 441 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 HMGCLL1Q8TB92 370 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PDCD6IPQ8WUM4 868 aaKnown RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 KLHDC7BQ96G42 594 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PDXPQ96GD0 296 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 UBXN10Q96LJ8 280 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CPNE1Q99829 537 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 SUFUQ9UMX1 484 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 INVSQ9Y283 1065 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 VPS9D1Q9Y2B5 631 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CA5BQ9Y2D0 317 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 RPS6KL1Q9Y6S9 549 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 LMO7DNF2Z398 122 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PCCBP05166 539 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 KELP23276 732 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CLPPQ16740 277 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 NEPROQ6NW34 567 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 RBFAQ8N0V3 343 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 FSTL5Q8N475 847 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 TMEM151AQ8N4L1 468 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF548Q8NEK5 533 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 LKAAEAR1Q8TD35 194 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 RAB33BQ9H082 229 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 BPIFA1Q9NP55 256 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC23A2Q9UGH3 650 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD84Q9UIB8 345 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 OR1A2Q9Y585 309 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 PSAT1Q9Y617 370 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCDC151A5D8V7 595 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 GOLGA8MH3BSY2 632 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 SCAMP1O15126 338 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 BNIP3LO60238 219 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CBSLP0DN79 551 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 XRCC1P18887 633 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 ITGALP20701 1170 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CBSP35520 551 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 FASLGP48023 281 aa8.16□□□□□ -1.1
CDC42SE2-208ENST00000505065 CTSCP53634 463 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms