RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ARFGAP3Q9NP61 516 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 DMGDHQ9UI17 866 aaKnown RBP11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 MOSPD1Q9UJG1 213 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 SUFUQ9UMX1 484 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 MAD1L1Q9Y6D9 718 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 TEX264Q9Y6I9 313 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
PDLIM5-208ENST00000504489 SPTBN4Q9H254 2564 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PTPRBP23467 1997 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 NEMP2A6NFY4 417 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 LMO7DNF2Z398 122 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TPP1O14773 563 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 SLC30A4O14863 429 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TM4SF5O14894 197 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 EIF3HO15372 352 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FLRT2O43155 660 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 AQP9O43315 295 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GRID2O43424 1007 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 SDC3O75056 442 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CDK14O94921 469 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TTC4O95801 387 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 POLBP06746 335 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZNF8P17098 575 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 MSH3P20585 1137 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 SDHBP21912 280 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ACRV1P26436 265 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ARNTP27540 789 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GNPDA1P46926 289 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ARCN1P48444 511 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CDKN1CP49918 316 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PLTPP55058 493 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GUCY2DQ02846 1103 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TRADDQ15628 312 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 INAVAQ3KP66 663 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZNF648Q5T619 568 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 LYPLAL1Q5VWZ2 237 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PSAPL1Q6NUJ1 521 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 LVRNQ6Q4G3 990 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CES3Q6UWW8 571 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZDHHC24Q6UX98 284 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CERS6Q6ZMG9 384 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TAS2R42Q7RTR8 314 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 SERPINA9Q86WD7 417 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GATAD2AQ86YP4 633 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GALNT13Q8IUC8 556 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PIANPQ8IYJ0 282 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZNF548Q8NEK5 533 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 GPBAR1Q8TDU6 330 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 LMX1AQ8TE12 382 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZNF669Q96BR6 464 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PWWP2AQ96N64 755 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TTC25Q96NG3 672 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FCRL3Q96P31 734 aaPredicted RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TTC1Q99614 292 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FOXP3Q9BZS1 431 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 PHACTR1Q9C0D0 580 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CLPBQ9H078 707 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 TMEM168Q9H0V1 697 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 OR2AG1Q9H205 316 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FAM96AQ9H5X1 160 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 CARS2Q9HA77 564 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 EPB41L5Q9HCM4 733 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FAM114A2Q9NRY5 505 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 UCKL1Q9NWZ5 548 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZDHHC3Q9NYG2 299 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZNHIT2Q9UHR6 403 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 FAM169AQ9Y6X4 670 aa11.76□□□□□ -0.53
PDLIM5-208ENST00000504489 ZCWPW2A0A1B0GU75 182 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 SCAMP1O15126 338 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 CD3EAPO15446 510 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 MTX2O75431 263 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 BANF1O75531 89 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 VAPBO95292 243 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PRSS56P0CW18 603 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 GIMD1P0DJR0 217 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 RALBP11234 206 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PGAM1P18669 254 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 AKT1P31749 480 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PPARGP37231 505 aaPredicted RBP11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 ELK3P41970 407 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 GRK6P43250 576 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 C1orf61Q13536 156 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 GTF2H3Q13889 308 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 LRP8Q14114 963 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 ITIH4Q14624 930 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 DBN1Q16643 649 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 FASTKD1Q53R41 847 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 SPANXN3Q5MJ09 141 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PACS1Q6VY07 963 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 MICALCLQ6ZW33 695 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 CENPUQ71F23 418 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 MARK2Q7KZI7 788 aaKnown RBP11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 PIP4P1Q86T03 277 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 LRRTM4Q86VH4 590 aa11.75□□□□□ -0.53
PDLIM5-208ENST00000504489 GKN2Q86XP6 184 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms