RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 AP3D1O14617 1153 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TULP3O75386 442 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 STK16O75716 305 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TRBC1P01850 177 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 NRG1Q02297 640 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CACNG1Q06432 222 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 POM121L1PQ3SYA9 428 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DCAF12L1Q5VU92 463 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CBR4Q8N4T8 237 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TEPSINQ96N21 525 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC28A3Q9HAS3 691 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DTLQ9NZJ0 730 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 NUP188Q5SRE5 1749 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 GLYATL1P3A0A0U1RQE8 302 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 YJEFN3A6XGL0 299 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 SRP54P61011 504 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 IL10RBQ08334 325 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 MTAPQ13126 283 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 PYDC2Q56P42 97 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 RALGPS1Q5JS13 557 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 OTOP2Q7RTS6 562 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 RALGPS2Q86X27 583 aaPredicted RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 FBXO22Q8NEZ5 403 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TEX47Q8TBZ9 253 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DNAJC11Q9NVH1 559 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CAPGP40121 348 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CCR4P51679 360 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DSC2Q02487 901 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 BIKQ13323 160 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 IL23RQ5VWK5 629 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CRTC3Q6UUV7 619 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 RBM23Q86U06 439 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ZBTB46Q86UZ6 589 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TMEM192Q8IY95 271 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CPA6Q8N4T0 437 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 CXorf40BQ96DE9 158 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ABCG8Q9H221 673 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 POLR1DQ9Y2S0 133 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ARVCFO00192 962 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 SERPINA1P01009 418 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 COL6A1P12109 1028 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 IGFBP5P24593 272 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 AP1S1P61966 158 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 TRMT10BQ6PF06 316 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 PDPRQ8NCN5 879 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 BCAS3Q9H6U6 928 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 DNAJB4Q9UDY4 337 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC38A8A6NNN8 435 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 F2P00734 622 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ASMTP46597 345 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 RFWD3Q6PCD5 774 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ZNF554Q86TJ5 538 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ZBTB2Q8N680 514 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 ARL10Q8N8L6 244 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 NPLOC4Q8TAT6 608 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 AHCYL2Q96HN2 611 aaKnown RBP16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 HAPLN3Q96S86 360 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 RHBGQ9H310 441 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 PLK2Q9NYY3 685 aa16.03■□□□□ 0.16
HMGXB3-202ENST00000503427 IRGMA1A4Y4 181 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 IDH3BO43837 385 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 ZBTB11O95625 1053 aaPredicted RBP16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC35G4P0C7Q5 338 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 TPGS2Q68CL5 300 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 CLHC1Q8NHS4 586 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 AARSD1Q9BTE6 412 aaKnown RBP16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 MINDY3Q9H8M7 445 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 A0A0U1RQF3 1178 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 URADA6NGE7 173 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 BCKDKO14874 412 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 SLC7A4O43246 635 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 KCNE1P15382 129 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 CAPN13Q6MZZ7 669 aaPredicted RBP16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 CDH24Q86UP0 819 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 CMTM6Q9NX76 183 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 WASF2Q9Y6W5 498 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.16
HMGXB3-202ENST00000503427 RGS10O43665 173 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 SCELO95171 688 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 ELP6Q0PNE2 266 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 ACSBG2Q5FVE4 666 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 DEF8Q6ZN54 512 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 TMEM110Q86TL2 294 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 UNC5BQ8IZJ1 945 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 SMYD1Q8NB12 490 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 HM13Q8TCT9 377 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 CCL16O15467 120 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 CLDN9O95484 217 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 CTSKP43235 329 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 COLGALT2Q8IYK4 626 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 OR6K2Q8NGY2 324 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 PIH1D2Q8WWB5 315 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 LRTOMTQ8WZ04 291 aa16.02■□□□□ 0.15
HMGXB3-202ENST00000503427 KLHL31Q9H511 634 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms