RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 LRRC57Q8N9N7 239 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 BBOF1Q8ND07 529 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 FBXO25Q8TCJ0 367 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ATP8B4Q8TF62 1192 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 HMGB4Q8WW32 186 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 CPT1BQ92523 772 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ARHGEF2Q92974 986 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 USP13Q92995 863 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ATP6V0A1Q93050 837 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 HAUS1Q96CS2 278 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 SNF8Q96H20 258 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 FAR2Q96K12 515 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 C9orf72Q96LT7 481 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 MACROD1Q9BQ69 325 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 MSTO1Q9BUK6 570 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 CINPQ9BW66 212 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ROPN1BQ9BZX4 212 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 TRIM7Q9C029 511 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 BRD8Q9H0E9 1235 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 POLR3FQ9H1D9 316 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 CARD9Q9H257 536 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 CDCP1Q9H5V8 836 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ECT2Q9H8V3 914 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ROPN1Q9HAT0 212 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 USP29Q9HBJ7 922 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 MRPL47Q9HD33 250 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 SLC40A1Q9NP59 571 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 MYOZ2Q9NPC6 264 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ZNF302Q9NR11 478 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 ANKEF1Q9NU02 776 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 GAR1Q9NY12 217 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 NDUFAF4Q9P032 175 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 SLC9A2Q9UBY0 812 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 SERGEFQ9UGK8 458 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 CNOT7Q9UIV1 285 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 KCND3Q9UK17 655 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 TTC7AQ9ULT0 858 aaPredicted RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 AGTPBP1Q9UPW5 1226 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 PCDHB7Q9Y5E2 793 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 PCDHB2Q9Y5E7 798 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 UBIAD1Q9Y5Z9 338 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 PHLPP1O60346 1717 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 SHANK3Q9BYB0 1731 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 PFASO15067 1338 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 IGSF9BQ9UPX0 1349 aa3.18□□□□□ -1.9
CDC42SE2-205ENST00000502840 A0A1B0GUL6 1792 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MYH8P13535 1937 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CHD4Q14839 1912 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ECM29Q5VYK3 1845 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 DOCK2Q92608 1830 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 DNAJC9-AS1A6NH13 148 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 LINC01548A6NM66 108 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 H0YGN5 161 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 H7C0C1 242 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CHUKO15111 745 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 WDR46O15213 610 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 NKX2-8O15522 239 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RIPK2O43353 540 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 TRAPPC3O43617 180 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 EXTL3O43909 919 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 PROSCO94903 275 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 KAT7O95251 611 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 TNNC2P02585 160 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 PRKCGP05129 697 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CYP1A2P05177 515 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 POLBP06746 335 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 WEE2P0C1S8 567 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 FAM163BP0C2L3 166 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MYBL1P10243 752 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RALAP11233 206 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RARGP13631 454 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ETS1P14921 441 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RRM1P23921 792 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MARK3P27448 753 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 SERPINA4P29622 427 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MAN1A1P33908 653 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MAP2K2P36507 400 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MAGEA4P43358 317 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 MAPK9P45984 424 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ATP5OP48047 213 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 PEX5P50542 639 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 PAPOLAP51003 745 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 GPC3P51654 580 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ARSEP51690 589 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 HMGCS2P54868 508 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 KRTAP10-11P60412 298 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ACTR2P61160 394 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RPL15P61313 204 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 SNRPFP62306 86 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CYP4F2P78329 520 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 IRX3P78415 501 aaPredicted RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CAV1Q03135 178 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 ZBTB16Q05516 673 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 RNASELQ05823 741 aaKnown RBP3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CXCL9Q07325 125 aa3.17□□□□□ -1.9
CDC42SE2-205ENST00000502840 CYP24A1Q07973 514 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms