RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 WDR19Q8NEZ3 1342 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF521Q96K83 1311 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A1W2PRG0 241 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 MATN2O00339 956 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 O00370 1275 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RECQL4O94761 1208 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 VNN1O95497 513 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 FCER1AP12319 257 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 KRT5P13647 590 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 ADRA2CP18825 462 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 EPHA3P29320 983 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 SFNP31947 248 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RPS6KA3P51812 740 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 ARSFP54793 590 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CDH13P55290 713 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRKCZQ05513 592 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GABPB1Q06547 395 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 E2F2Q14209 437 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 FGFBP1Q14512 234 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC39A14Q15043 492 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 TAF1BQ53T94 588 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 C6orf136Q5SQH8 315 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 DAB2IPQ5VWQ8 1189 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 PLA2G4FQ68DD2 849 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 PM20D1Q6GTS8 502 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GJB7Q6PEY0 223 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RBM43Q6ZSC3 357 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CENPQQ7L2Z9 268 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GSTA5Q7RTV2 222 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RNF144BQ7Z419 303 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPAT4Q86UL3 456 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 NUDT13Q86X67 352 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CPXM2Q8N436 756 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 C11orf65Q8NCR3 313 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCNYQ8ND76 341 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 BEND2Q8NDZ0 799 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 MDGA1Q8NFP4 955 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR52N2Q8NGI0 321 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 OCC1Q8TAD7 63 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RNASE8Q8TDE3 154 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 C2CD4CQ8TF44 421 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 METTL21AQ8WXB1 218 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 OVCA2Q8WZ82 227 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 FRAT1Q92837 279 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RMDN2Q96LZ7 410 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 PKP2Q99959 881 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 NACAP1Q9BZK3 213 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 API5Q9BZZ5 524 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCSER1Q9C0I3 900 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GORASP2Q9H8Y8 452 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 AGO3Q9H9G7 860 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 TUFT1Q9NNX1 390 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 GLRX2Q9NS18 164 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC22A11Q9NSA0 550 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 HOMER3Q9NSC5 361 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CENPMQ9NSP4 180 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 ARL8BQ9NVJ2 186 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 HEY2Q9UBP5 337 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 NARFQ9UHQ1 456 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 FBXW11Q9UKB1 542 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 DDX19BQ9UMR2 479 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 NAALAD2Q9Y3Q0 740 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 CMAHPQ9Y471 501 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 DLG5Q8TDM6 1919 aa4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 BRCA1P38398 1863 aaKnown RBP4.32□□□□□ -1.72
HMGB1P21-201ENST00000502313 TTC41PQ6P2S7 1318 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SALL3Q9BXA9 1300 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A087WV48 116 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CYP3A7-CYP3A51PA0A087WV96 503 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ELOVL7A1L3X0 281 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 DENND3A2RUS2 1198 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CGB1A6NKQ9 187 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 DRGXA6NNA5 263 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC188H7C350 402 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 PPEF2O14830 753 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 PPM1DO15297 605 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 PAX4O43316 350 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 GMFGO60234 142 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 NOBOXO60393 691 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CYTIPO60759 359 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 NDUFS3O75489 264 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC25A12O75746 678 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZWINTO95229 277 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 AK1P00568 194 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 FGBP02675 491 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ERBB2P04626 1255 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 HLA-DOAP06340 250 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ASGR1P07306 291 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ABHD2P08910 425 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 TACR2P21452 398 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 CYP3A7P24462 503 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SERPINB6P35237 376 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 SOX6P35712 828 aa4.31□□□□□ -1.72
HMGB1P21-201ENST00000502313 ECT2LQ008S8 904 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms