RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 FAM72BQ86X60 149 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 LYSMD2Q8IV50 215 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 CLYBLQ8N0X4 340 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 APPL2Q8NEU8 664 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 OR10A6Q8NH74 314 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 FAM45AQ8TCE6 357 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 PMEPA1Q969W9 287 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 LOC100130705A0A1B0GUX0 176 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 MAGEA6P43360 314 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 KRT6CP48668 564 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 DET1Q7L5Y6 550 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 EID3Q8N140 333 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 CDYL2Q8N8U2 506 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 LEMD2Q8NC56 503 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 UBE2FQ969M7 185 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZUFSPQ96AP4 578 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ROPN1LQ96C74 230 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 CCDC120Q96HB5 630 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 TBATAQ96M53 351 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 Q96MT0 163 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 SMOC2Q9H3U7 446 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZNF385DQ9H6B1 395 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 KAT8Q9H7Z6 458 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 C12orf4Q9NQ89 552 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 USE1Q9NZ43 259 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 RGS17Q9UGC6 210 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 C3orf18Q9UK00 162 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 NPHS1O60500 1241 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 UPK1BO75841 260 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 C1RP00736 705 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ANXA6P08133 673 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 PAMP19021 973 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 POLR2EP19388 210 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 POLD2P49005 469 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 RAPSNQ13702 412 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 MXD4Q14582 209 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZNF404Q494X3 552 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 SLC16A12Q6ZSM3 486 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 SPRED1Q7Z699 444 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 HORMAD1Q86X24 394 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 METTL4Q8N3J2 472 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 TCAIMQ8N3R3 496 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 MINDY2Q8NBR6 621 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 CLHC1Q8NHS4 586 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ANKRD49Q8WVL7 239 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 VAT1Q99536 393 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 MLPHQ9BV36 600 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 ACTR8Q9H981 624 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 KLK14Q9P0G3 267 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 GMIPQ9P107 970 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 CPA4Q9UI42 421 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 EIF3LQ9Y262 564 aaKnown RBP10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 TPRKBQ9Y3C4 175 aa10.54□□□□□ -0.72
TRAPPC12-223ENST00000497597 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 OR6C70A6NIJ9 312 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 E5RI56 91 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 TSPAN4O14817 238 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 MSCO60682 206 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 FKBP9O95302 570 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CPNE6O95741 557 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 RBP1P09455 135 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 WEE1P30291 646 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 ACADSBP45954 432 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 IDH2P48735 452 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 MAXP61244 160 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 ADARB1P78563 741 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 RBP5P82980 135 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 KCNC4Q03721 635 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 RBM48Q5RL73 367 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 GTF2IRD2BQ6EKJ0 949 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 LCN8Q6JVE9 175 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 TMEM135Q86UB9 458 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 GTF2IRD2Q86UP8 949 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 HIPK1Q86Z02 1210 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 BEND7Q8N7W2 519 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 OR5H6Q8NGV6 325 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 TEX37Q96LM6 180 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CDK15Q96Q40 435 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 PSD2Q9BQI7 771 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CDH9Q9ULB4 789 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 TNS1Q9HBL0 1735 aaKnown RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CDK5RAP2Q96SN8 1893 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 SLC12A8A0AV02 714 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 A8MX80 341 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 HACD1B0YJ81 288 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 PRMT5O14744 637 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 GRK3P35626 688 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 IL12RB1P42701 662 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 DGKEP52429 567 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 RAB25P57735 213 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CACNB2Q08289 660 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 CTF1Q16619 201 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 LCLAT1Q6UWP7 414 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 ZPBP2Q6X784 338 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 GALNT13Q8IUC8 556 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 FAM20CQ8IXL6 584 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 MFSD4AQ8N468 514 aa10.53□□□□□ -0.72
TRAPPC12-223ENST00000497597 AMER2Q8N7J2 671 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms