RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 ATP13A4Q4VNC1 1196 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 ZFYVE27Q5T4F4 411 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 KLHL35Q6PF15 583 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 BZW1Q7L1Q6 419 aaKnown RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 ADGRG6Q86SQ4 1221 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 PTRH1Q86Y79 214 aaKnown RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 CNTD1Q8N815 330 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 ABHD17AQ96GS6 310 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 VPS35Q96QK1 796 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 TRIB3Q96RU7 358 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 TBC1D10AQ9BXI6 508 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 MAK16Q9BXY0 300 aaKnown RBP16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 SLC25A51Q9H1U9 297 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 TSPY26PQ9H489 355 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 OSGEPL1Q9H4B0 414 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 TRABDQ9H4I3 376 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 APMAPQ9HDC9 416 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 IFNKQ9P0W0 207 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 POLHQ9Y253 713 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 PCDHGA6Q9Y5G7 932 aa16.59■□□□□ 0.25
TRAPPC3-207ENST00000497251 KCNK1O00180 336 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 CDK14O94921 469 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 PRKAR1AP10644 381 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 FGF5P12034 268 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 OAS2P29728 719 aaKnown RBP16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 SLC19A1P41440 591 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 ARHGAP25P42331 645 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 CDK18Q07002 472 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 FOXM1Q08050 763 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 DEFB109BQ30KR1 87 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 SLC9A4Q6AI14 798 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 TCTN3Q6NUS6 607 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 GPR26Q8NDV2 337 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 KLHL6Q8WZ60 621 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 TADA1Q96BN2 335 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 GPR63Q9BZJ6 419 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 SLC40A1Q9NP59 571 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 SEMA5BQ9P283 1151 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 ANKMY1Q9P2S6 941 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 KLHL3Q9UH77 587 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 NENFQ9UMX5 172 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 DNMT3AQ9Y6K1 912 aaPredicted RBP16.58■□□□□ 0.24
TRAPPC3-207ENST00000497251 KLHL33A6NCF5 533 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 PDZK1P1A8MUH7 402 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 C21orf140B9A014 251 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 NDST3O95803 873 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 EPOP01588 193 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 CAPZBP47756 277 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 SLC18A3Q16572 532 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 SKIDA1Q1XH10 827 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 LRRC38Q5VT99 294 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 UNC5BQ8IZJ1 945 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 UBXN4Q92575 508 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 EID2BQ96D98 161 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 STAMBPL1Q96FJ0 436 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 ZCCHC2Q9C0B9 1178 aaKnown RBP16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 PDE7BQ9NP56 450 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 OGFRQ9NZT2 677 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 ZNF624Q9P2J8 865 aaPredicted RBP16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 PADI1Q9ULC6 663 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 ZNF711Q9Y462 761 aa16.57■□□□□ 0.24
TRAPPC3-207ENST00000497251 CLEC18AA5D8T8 446 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 APOL1O14791 398 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 CBFA2T2O43439 604 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 NDUFA10O95299 355 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 NELFEP18615 380 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 HMGCLP35914 325 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 GJC1P36383 396 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 DLSTP36957 453 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 HALP42357 657 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 NR2C2P49116 596 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 TAS2R40P59535 323 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 AP1B1Q10567 949 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 GTF2H3Q13889 308 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 CLEC18BQ6UXF7 455 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 PPP1R3BQ86XI6 285 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 KMT5CQ86Y97 462 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 RASGRP3Q8IV61 690 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 PLD5Q8N7P1 536 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 CLEC18CQ8NCF0 446 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 CPLX3Q8WVH0 158 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 RAPGEF5Q92565 580 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 CXorf40BQ96DE9 158 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 TTC25Q96NG3 672 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 TGM7Q96PF1 710 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 OR6C1Q96RD1 312 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 GPR87Q9BY21 358 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 ZNF71Q9NQZ8 489 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 HEY1Q9Y5J3 304 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 SLC30A1Q9Y6M5 507 aa16.56■□□□□ 0.24
TRAPPC3-207ENST00000497251 NOTCH2Q04721 2471 aa16.55■□□□□ 0.24
TRAPPC3-207ENST00000497251 SSU72P8A0A1W2PR75 194 aa16.55■□□□□ 0.24
TRAPPC3-207ENST00000497251 LRRD1A4D1F6 860 aa16.55■□□□□ 0.24
TRAPPC3-207ENST00000497251 MTSS1O43312 755 aa16.55■□□□□ 0.24
TRAPPC3-207ENST00000497251 RASSF9O75901 435 aa16.55■□□□□ 0.24
TRAPPC3-207ENST00000497251 GYPCP04921 128 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms