RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RHBDF2Q6PJF5 856 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 DENND5BQ6ZUT9 1274 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SCN4BQ8IWT1 228 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 BBS7Q8IWZ6 715 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 GPD1LQ8N335 351 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 GALNT4Q8N4A0 578 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 TXNDC5Q8NBS9 432 aaKnown RBP4.39□□□□□ -1.71
VPS52-222ENST00000495981 B3GALNT2Q8NCR0 500 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 ZMIZ2Q8NF64 920 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 CEP70Q8NHQ1 597 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 RASSF8Q8NHQ8 419 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 MYCBPAPQ8TBZ2 947 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SETD7Q8WTS6 366 aaKnown RBP4.39□□□□□ -1.71
VPS52-222ENST00000495981 ERLEC1Q96DZ1 483 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 MED8Q96G25 268 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 HPDLQ96IR7 371 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SLC46A1Q96NT5 459 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 ACCSQ96QU6 501 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 IMPG2Q9BZV3 1241 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SDCBP2Q9H190 292 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 LINC00597Q9H2U6 94 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 FAM83DQ9H4H8 585 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SMYD3Q9H7B4 428 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 L2HGDHQ9H9P8 463 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SEPSECSQ9HD40 501 aaKnown RBP4.39□□□□□ -1.71
VPS52-222ENST00000495981 AGPAT3Q9NRZ7 376 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 PCMTD2Q9NV79 361 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 IL37Q9NZH6 218 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 EXOC7Q9UPT5 735 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 DNAJC16Q9Y2G8 782 aa4.39□□□□□ -1.71
VPS52-222ENST00000495981 SRPRBQ9Y5M8 271 aaKnown RBP4.39□□□□□ -1.71
VPS52-222ENST00000495981 COL27A1Q8IZC6 1860 aaPredicted RBP4.39□□□□□ -1.71
VPS52-222ENST00000495981 MYO18AQ92614 2054 aaKnown RBP4.38□□□□□ -1.71
VPS52-222ENST00000495981 UBE2QL1A1L167 161 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 VPS37CA5D8V6 355 aaPredicted RBP4.38□□□□□ -1.71
VPS52-222ENST00000495981 AQP7P3A6NL99 342 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.38□□□□□ -1.71
VPS52-222ENST00000495981 J3KTA2 159 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 AHCYL1O43865 530 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 PPP6R2O75170 966 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 COQ9O75208 318 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 VPS4BO75351 444 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TULP3O75386 442 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 CSF1P09603 554 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 STAT6P42226 847 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 RBP5P82980 135 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ZNF33AQ06730 810 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TAF10Q12962 218 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ERV3-1Q14264 604 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 IGFBP7Q16270 282 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 KCNMB1Q16558 191 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 SNRNP35Q16560 246 aaKnown RBP4.38□□□□□ -1.71
VPS52-222ENST00000495981 INSCQ1MX18 579 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 PTCHD3Q3KNS1 767 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 LINC00303Q3SY05 128 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 NRN1LQ496H8 165 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 GALNTL6Q49A17 601 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 SPDYCQ5MJ68 293 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 WDR45BQ5MNZ6 344 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 EOGTQ5NDL2 527 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 LY6G5CQ5SRR4 150 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 PAQR9Q6ZVX9 377 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 RAB11FIP2Q7L804 512 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TRAPPC11Q7Z392 1133 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 KRT77Q7Z794 578 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 RASGRP3Q8IV61 690 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 C12orf56Q8IXR9 622 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 FUKQ8N0W3 1084 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 CFAP52Q8N1V2 620 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 CSGALNACT2Q8N6G5 542 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 AOPEPQ8N6M6 819 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 LSMEM1Q8N8F7 131 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 FSIP1Q8NA03 581 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ADAMTS15Q8TE58 950 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 SCFD1Q8WVM8 642 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 HMGB4Q8WW32 186 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 OVCA2Q8WZ82 227 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 FGF11Q92914 225 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ANKRD36BP1Q96IX9 119 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 USP28Q96RU2 1077 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ACOX2Q99424 681 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 GABRG3Q99928 467 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TTYH3Q9C0H2 523 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 SLC25A32Q9H2D1 315 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 TNMDQ9H2S6 317 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ZNF768Q9H5H4 540 aaKnown RBP4.38□□□□□ -1.71
VPS52-222ENST00000495981 PANK4Q9NVE7 773 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 OSER1Q9NX31 292 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 KCND3Q9UK17 655 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 GPR34Q9UPC5 381 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 CNTN6Q9UQ52 1028 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 SMC3Q9UQE7 1217 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 MTMR6Q9Y217 621 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 PMF1-BGLAPU3KQ54 211 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 MYH10P35580 1976 aa4.38□□□□□ -1.71
VPS52-222ENST00000495981 ABCA2Q9BZC7 2435 aa4.37□□□□□ -1.71
VPS52-222ENST00000495981 PDZD2O15018 2839 aa4.37□□□□□ -1.71
VPS52-222ENST00000495981 CCDC78A2IDD5 438 aa4.37□□□□□ -1.71
VPS52-222ENST00000495981 LRRIQ3A6PVS8 624 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms