RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 URB1O60287 2271 aaKnown RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 ECEL1O95672 775 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 SLC4A1P02730 911 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 RBP3P10745 1247 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 BPIP17213 487 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 ECHS1P30084 290 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 COILP38432 576 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PTGIRP43119 386 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 GPR3P46089 330 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 FASLGP48023 281 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 DRG2P55039 364 aaKnown RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 INHBCP55103 352 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 EIF3EP60228 445 aaKnown RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 B4GALNT1Q00973 533 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 GPS2Q13227 327 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 SLC1A5Q15758 541 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 ZDHHC20Q5W0Z9 365 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 SYDE1Q6ZW31 735 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 JAMLQ86YT9 394 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PHYKPLQ8IUZ5 450 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 TTC30BQ8N4P2 665 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 IPMKQ8NFU5 416 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 DTX3LQ8TDB6 740 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PATE1Q8WXA2 126 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 GLYATL1Q969I3 302 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PRR11Q96HE9 360 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 VPS35Q96QK1 796 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 STRADBQ9C0K7 418 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PLEKHM1Q9Y4G2 1056 aa13.05□□□□□ -0.32
ERCC3-209ENST00000494464 PCYT1BQ9Y5K3 369 aaPredicted RBP13.05□□□□□ -0.32
ERCC3-209ENST00000494464 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 BPTFQ12830 3046 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 TCRBV7S2A1N4TA0A589 114 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 RHPN2P1A8MT19 583 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 CDRT15L2A8MXV6 281 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 AURKAO14965 403 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ZW10O43264 779 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 NUAK1O60285 661 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ANXA9O76027 345 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 SLC25A14O95258 325 aaPredicted RBP13.04□□□□□ -0.32
ERCC3-209ENST00000494464 CHRNA4P43681 627 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 GEMP55040 296 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ZFP36L1Q07352 338 aaKnown RBP13.04□□□□□ -0.32
ERCC3-209ENST00000494464 DUPD1Q68J44 220 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 TTC27Q6P3X3 843 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 CCDC137Q6PK04 289 aaKnown RBP13.04□□□□□ -0.32
ERCC3-209ENST00000494464 C19orf48Q6RUI8 117 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 LRRC69Q6ZNQ3 347 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 CLEC14AQ86T13 490 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 Q8N9G6 341 aaPredicted RBP13.04□□□□□ -0.32
ERCC3-209ENST00000494464 SLC37A2Q8TED4 501 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 PPP1R2P1Q96PQ5 205 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 GORASP1Q9BQQ3 440 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ERP44Q9BS26 406 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 TRIM39Q9HCM9 518 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ATXN10Q9UBB4 475 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 ZNHIT2Q9UHR6 403 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
ERCC3-209ENST00000494464 A6NCN8 305 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 PLD2O14939 933 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 CHUKO15111 745 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 GRID2O43424 1007 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 STK10O94804 968 aaKnown RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 CPNE6O95741 557 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ZNF8P17098 575 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 RBMS1P29558 406 aaKnown RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 CLCNKAP51800 687 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 BIRC2Q13490 618 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 CHST15Q7LFX5 561 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 GLT6D1Q7Z4J2 308 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 SLITRK4Q8IW52 837 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 SFRP1Q8N474 314 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 SLC25A41Q8N5S1 370 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 TTC13Q8NBP0 860 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 GRK7Q8WTQ7 553 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 TMEM159Q96B96 161 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 SPATA13Q96N96 652 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 IL17CQ9P0M4 197 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 ATXN7L1Q9ULK2 861 aaPredicted RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
ERCC3-209ENST00000494464 PRKAB1Q9Y478 270 aa13.03□□□□□ -0.32
ERCC3-209ENST00000494464 NBEAQ8NFP9 2946 aa13.02□□□□□ -0.33
ERCC3-209ENST00000494464 PMS2P1A4D2B8 440 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms