RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 TLN2Q9Y4G6 2542 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 TTC24A2A3L6 582 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 CCDC78A2IDD5 438 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 TRAFD1O14545 582 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 PCDH17O14917 1159 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 DNAJC6O75061 913 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 PALMO75781 387 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 UNC5CO95185 931 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CLDN14O95500 239 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SOD1P00441 154 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 JCHAINP01591 159 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 IGHEP01854 428 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CAPN1P07384 714 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 CYP2A6P11509 494 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 FOSL1P15407 271 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 XRCC1P18887 633 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 KRT9P35527 623 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SLC19A1P41440 591 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CA7P43166 264 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CAPZBP47756 277 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 ARCN1P48444 511 aaKnown RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 CSNK1DP48730 415 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SCNN1BP51168 640 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SMSP52788 366 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 YBEYP58557 167 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 ADORA2A-AS1P86434 159 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 FKBP3Q00688 224 aaKnown RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 DPTQ07507 201 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 PRKD1Q15139 912 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 CDSNQ15517 529 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CDO1Q16878 200 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 B3GNTL1Q67FW5 361 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 FAAH2Q6GMR7 532 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 PLEKHA7Q6IQ23 1121 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 TRNP1Q6NT89 227 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 FAM198BQ6UWH4 519 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 TSPAN33Q86UF1 283 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 PHYKPLQ8IUZ5 450 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 RTL3Q8N8U3 475 aaKnown RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 GPT2Q8TD30 523 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 COG1Q8WTW3 980 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 CPT1BQ92523 772 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 UBXN4Q92575 508 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SCAMP4Q969E2 229 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 NSMCE3Q96MG7 304 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 AGAP3Q96P47 875 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 AGAP2Q99490 1192 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 SMR3AQ99954 134 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 FOXC2Q99958 501 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 ATP13A2Q9NQ11 1180 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 ZNF624Q9P2J8 865 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 PCDHGC3Q9UN70 934 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 NEU3Q9UQ49 428 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 RPH3AQ9Y2J0 694 aaPredicted RBP6.67□□□□□ -1.34
FN1-225ENST00000494446 SIK3Q9Y2K2 1263 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 ATP6V1DQ9Y5K8 247 aa6.67□□□□□ -1.34
FN1-225ENST00000494446 HRNRQ86YZ3 2850 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 A0A1B0GVL5 298 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TRIM49BA6NDI0 452 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 NPIPB15A6NHN6 443 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 BECN2A8MW95 431 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 C9J4A7 227 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PSMD11O00231 422 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PMM2O15305 246 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 DDX3YO15523 660 aaKnown RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 CPP00450 1065 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 AGAP20933 346 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 LHCGRP22888 699 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 EPHB2P29323 1055 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TDGF1P3P51864 188 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TUBB4BP68371 445 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 HSD11B2P80365 405 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TUBB2AQ13885 445 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 GPR18Q14330 331 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 SSPNQ14714 243 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 NCF4Q15080 339 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TLR1Q15399 786 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 PTCHD3Q3KNS1 767 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PARP15Q460N3 678 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 CCDC40Q4G0X9 1142 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 C2CD6Q53TS8 623 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 FOXD4L5Q5VV16 416 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 MLIPQ5VWP3 458 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TMEM198Q66K66 360 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 GJB7Q6PEY0 223 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 BNIPLQ7Z465 357 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TECPR1Q7Z6L1 1165 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 TMEM200AQ86VY9 491 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 SYTL1Q8IYJ3 562 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 OR1N1Q8NGS0 311 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 OR8K5Q8NH50 307 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 EXD1Q8NHP7 514 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 FOXD4L4Q8WXT5 416 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 NR4A3Q92570 626 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 ZNF501Q96CX3 271 aaPredicted RBP6.66□□□□□ -1.34
FN1-225ENST00000494446 C18orf8Q96DM3 657 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 COX14Q96I36 57 aa6.66□□□□□ -1.34
FN1-225ENST00000494446 PCMTD1Q96MG8 357 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms