RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ERVFC1-1P60608 527 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 STX1BP61266 288 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TUBB4BP68371 445 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ACY1Q03154 408 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CRYZQ08257 329 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TBL3Q12788 808 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CHIT1Q13231 466 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 BFSP2Q13515 415 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TUBB2AQ13885 445 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ACOX1Q15067 660 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PDK1Q15118 436 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SHBQ15464 509 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 DPYSL2Q16555 572 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CLPPQ16740 277 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 AAK1Q2M2I8 961 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TWISTNBQ3B726 338 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CRY2Q49AN0 593 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CCDC152Q4G0S7 254 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 AASDHQ4L235 1098 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ZRANB3Q5FWF4 1079 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 FBXO48Q5FWF7 155 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TEX35Q5T0J7 233 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 METTL11BQ5VVY1 283 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 RRAGBQ5VZM2 374 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CST9LP1Q5W188 147 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 KLC3Q6P597 504 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PARM1Q6UWI2 310 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SUSD1Q6UWL2 747 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PRSS57Q6UWY2 283 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 LRIG3Q6UXM1 1119 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PACS1Q6VY07 963 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 B3GNT6Q6ZMB0 384 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ERN2Q76MJ5 926 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 RRAGAQ7L523 313 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ARMC9Q7Z3E5 817 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 KRT28Q7Z3Y7 464 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TAF8Q7Z7C8 310 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CEP57Q86XR8 500 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CNTN4Q8IWV2 1026 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CDH26Q8IXH8 852 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SYCP3Q8IZU3 236 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CNTROBQ8N137 903 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SIX6OS1Q8N1H7 587 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 LINC00469Q8N7U9 141 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 NIPA2Q8N8Q9 360 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 POC5Q8NA72 575 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 FAM184AQ8NB25 1140 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 DBF4BQ8NFT6 615 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SUN3Q8TAQ9 357 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 KCNE4Q8WWG9 221 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SLC13A3Q8WWT9 602 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 OVCA2Q8WZ82 227 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 NCSTNQ92542 709 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SGCDQ92629 289 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 WBP2Q969T9 261 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 RAB7BQ96AH8 199 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 DHX58Q96C10 678 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SPACA9Q96E40 222 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 C19orf60Q96EN9 201 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ERO1AQ96HE7 468 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 DHTKD1Q96HY7 919 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CFAP57Q96MR6 1250 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ABHD1Q96SE0 405 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 RUFY1Q96T51 708 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 EIF3CQ99613 913 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 NAA11Q9BSU3 229 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TUBB2BQ9BVA1 445 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 C1QTNF5Q9BXJ0 243 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TEX13AQ9BXU3 409 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CAPS2Q9BXY5 557 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 MRPL1Q9BYD6 325 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 NFKBIZQ9BYH8 718 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SPRY4Q9C004 299 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 KLHL4Q9C0H6 718 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 MTMR12Q9C0I1 747 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SLC5A7Q9GZV3 580 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TAOK3Q9H2K8 898 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TTC12Q9H892 705 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 VEZTQ9HBM0 779 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 LTB4R2Q9NPC1 389 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 MBNL1Q9NR56 388 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 TBC1D23Q9NUY8 699 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CYP39A1Q9NYL5 469 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 EHD2Q9NZN4 543 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 ZNF212Q9UDV6 495 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CNOT7Q9UIV1 285 aaKnown RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PSME2Q9UL46 239 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 BARX2Q9UMQ3 279 aaPredicted RBP2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CLEC4AQ9UMR7 237 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 DAPP1Q9UN19 280 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PCDHB2Q9Y5E7 798 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 PCDHGA1Q9Y5H4 931 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SLC4A4Q9Y6R1 1079 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 CAPN7Q9Y6W3 813 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 SNED1Q8TER0 1413 aa2.24□□□□□ -2.05
PTPN12-212ENST00000494248 KIF7Q2M1P5 1343 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 MAP3K19Q56UN5 1328 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TTC41PQ6P2S7 1318 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms