RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 ACEP12821 1306 aa3.63□□□□□ -1.83
PHC3-213ENST00000491258 TNS2Q63HR2 1409 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 E9PCH4 1651 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 CROCC2H7BZ55 1655 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 RALGAPBQ86X10 1494 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 B9A039 149 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 TCERG1O14776 1098 aaKnown RBP3.62□□□□□ -1.83
PHC3-213ENST00000491258 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 PLIN5Q00G26 463 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 FOXM1Q08050 763 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 ANKRD1Q15327 319 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 ADCK5Q3MIX3 580 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 HIST2H2BDQ6DRA6 164 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 FAAP20Q6NZ36 180 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 ADSSL1Q8N142 457 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 DDHD1Q8NEL9 900 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 SVIPQ8NHG7 77 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 RASSF1Q9NS23 344 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 BEX4Q9NWD9 120 aaPredicted RBP3.62□□□□□ -1.83
PHC3-213ENST00000491258 JRKLQ9Y4A0 524 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 CENPJQ9HC77 1338 aaPredicted RBP3.62□□□□□ -1.83
PHC3-213ENST00000491258 CLTCL1P53675 1640 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 NRXN3Q9Y4C0 1643 aa3.62□□□□□ -1.83
PHC3-213ENST00000491258 POLR3AO14802 1390 aaPredicted RBP3.62□□□□□ -1.83
PHC3-213ENST00000491258 EIF3AQ14152 1382 aaKnown RBP3.62□□□□□ -1.83
PHC3-213ENST00000491258 BLMP54132 1417 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 POLR1AO95602 1720 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 CDC42BPGQ6DT37 1551 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 ZCWPW2A0A1B0GU75 182 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 EIF3DO15371 548 aaKnown RBP eCLIP3.61□□□□□ -1.83
PHC3-213ENST00000491258 EGFP01133 1207 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 TAS2R38P59533 333 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 CSNK2A1P68400 391 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 SPOCK1Q08629 439 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 NAE1Q13564 534 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 PRKG1Q13976 671 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 TRIM14Q14142 442 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 POSTNQ15063 836 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 HIST2H2ACQ16777 129 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 HSP90AB2PQ58FF8 381 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 ANKRD45Q5TZF3 282 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 ZNF280DQ6N043 979 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 BRAT1Q6PJG6 821 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 METTL7BQ6UX53 244 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 MOGAT3Q86VF5 341 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 FTSJ3Q8IY81 847 aaKnown RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 CSNK2A3Q8NEV1 391 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 OR5R1Q8NH85 324 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 COG8Q96MW5 612 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 IWS1Q96ST2 819 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 RBM4BQ9BQ04 359 aaKnown RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 EIF2AK1Q9BQI3 630 aaKnown RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 TRIM51Q9BSJ1 452 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 MCRIP2Q9BUT9 160 aaKnown RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 C2orf42Q9NWW7 574 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 ADPRHL2Q9NX46 363 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 MARCH4Q9P2E8 410 aaPredicted RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 ERVK-11Q9UQG0 969 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 KIAA0232Q92628 1395 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 XRN1Q8IZH2 1706 aaKnown RBP3.61□□□□□ -1.83
PHC3-213ENST00000491258 KIAA1210Q9ULL0 1709 aa3.61□□□□□ -1.83
PHC3-213ENST00000491258 ADGRB1O14514 1584 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 DUXAA6NLW8 204 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 NCAM2O15394 837 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 TFP02787 698 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 NR3C1P04150 777 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 GALTP07902 379 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 CNPP09543 421 aaKnown RBP3.6□□□□□ -1.83
PHC3-213ENST00000491258 AHRP35869 848 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 EFNB1P98172 346 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 CCDC174Q6PII3 467 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 ZNF704Q6ZNC4 412 aaPredicted RBP3.6□□□□□ -1.83
PHC3-213ENST00000491258 ANO5Q75V66 913 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 SLC46A3Q7Z3Q1 461 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 GPR180Q86V85 440 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 PLD5Q8N7P1 536 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 C11orf65Q8NCR3 313 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 ACVR1CQ8NER5 493 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 TNIP2Q8NFZ5 429 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 TRAPPC12Q8WVT3 735 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 NEUROD6Q96NK8 337 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 HEMGNQ9BXL5 484 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 BARHL2Q9NY43 387 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 PADI3Q9ULW8 664 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 KLHL20Q9Y2M5 609 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 ZHX2Q9Y6X8 837 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 CPDO75976 1380 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 COL5A2P05997 1499 aaPredicted RBP3.6□□□□□ -1.83
PHC3-213ENST00000491258 DLC1Q96QB1 1528 aa3.6□□□□□ -1.83
PHC3-213ENST00000491258 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.59□□□□□ -1.83
PHC3-213ENST00000491258 CACNA1AO00555 2505 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 SPINT2O43291 252 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 DCXO43602 365 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 TACC1O75410 805 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 ZNF23P17027 643 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 ARCN1P48444 511 aaKnown RBP3.59□□□□□ -1.83
PHC3-213ENST00000491258 TBX4P57082 545 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 SLC8A3P57103 927 aa3.59□□□□□ -1.83
PHC3-213ENST00000491258 CCSAPQ6IQ19 270 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms