RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PCDH12Q9NPG4 1184 aa14.1□□□□□ -0.15
RER1-207ENST00000488353 NECTIN3Q9NQS3 549 aa14.1□□□□□ -0.15
RER1-207ENST00000488353 CNGB3Q9NQW8 809 aa14.1□□□□□ -0.15
RER1-207ENST00000488353 CHST12Q9NRB3 414 aa14.1□□□□□ -0.15
RER1-207ENST00000488353 TTC3P53804 2025 aa14.1□□□□□ -0.15
RER1-207ENST00000488353 ISPDA4D126 451 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 GABARAPO95166 117 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 MT-ND1P03886 318 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 CCND3P30281 292 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 CACNB2Q08289 660 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 DPY19L1Q2PZI1 675 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 PCID2Q5JVF3 399 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 AGAP9Q5VTM2 703 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 ADCK1Q86TW2 530 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 SLC22A9Q8IVM8 553 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 TMEM125Q96AQ2 219 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 RPL10LQ96L21 214 aaKnown RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 RDH12Q96NR8 316 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 VAT1Q99536 393 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 TP63Q9H3D4 680 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 POLE4Q9NR33 117 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.09□□□□□ -0.15
RER1-207ENST00000488353 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 DKK3Q9UBP4 350 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 PCDHGA8Q9Y5G5 932 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 CENPBD1B2RD01 187 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 ELNP15502 786 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 NCK1P16333 377 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 SLC1A2P43004 574 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 CHRNA4P43681 627 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 CXCR3P49682 368 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 PPP5CP53041 499 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 TPD52P55327 224 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 FCGRTP55899 365 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 YBX1P67809 324 aaKnown RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 POU4F1Q01851 419 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 TOP3AQ13472 1001 aaPredicted RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 MAPK11Q15759 364 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 KCNA10Q16322 511 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 CRY1Q16526 586 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 IMPG1Q17R60 797 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 NOMO2Q5JPE7 1267 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 INTS6LQ5JSJ4 861 aaKnown RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 DCP1BQ8IZD4 617 aaKnown RBP14.09□□□□□ -0.15
RER1-207ENST00000488353 C3orf30Q96M34 536 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 RNF145Q96MT1 663 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 IL12RB2Q99665 862 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 IGSF5Q9NSI5 407 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 PADI3Q9ULW8 664 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 TESMINQ9Y4I5 508 aa14.09□□□□□ -0.15
RER1-207ENST00000488353 UBXN8O00124 270 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 AREL1O15033 823 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 SNPHO15079 494 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 CA12O43570 354 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 INMTO95050 263 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 MATN4O95460 622 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 GSNP06396 782 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 RBP1P09455 135 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 PLK1P53350 603 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 GP2P55259 537 aaKnown RBP14.08□□□□□ -0.15
RER1-207ENST00000488353 LIPEQ05469 1076 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 SREBF2Q12772 1141 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 LRIT3Q3SXY7 679 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 ZNF470Q6ECI4 717 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 BHLHA9Q7RTU4 235 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 KIAA2013Q8IYS2 634 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 ELMOD1Q8N336 334 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 CHDHQ8NE62 594 aaPredicted RBP14.08□□□□□ -0.15
RER1-207ENST00000488353 DNAJB14Q8TBM8 379 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 BPIFB1Q8TDL5 484 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 PHF10Q8WUB8 498 aaKnown RBP14.08□□□□□ -0.15
RER1-207ENST00000488353 BIRC7Q96CA5 298 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 PHF21BQ96EK2 531 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 NODALQ96S42 347 aa14.08□□□□□ -0.15
RER1-207ENST00000488353 NOL6Q9H6R4 1146 aaKnown RBP14.08□□□□□ -0.15
RER1-207ENST00000488353 ANKRD12Q6UB98 2062 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 ZNF99A8MXY4 864 aaPredicted RBP14.08□□□□□ -0.16
RER1-207ENST00000488353 HHLA1C9JL84 531 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 TNFRSF10AO00220 468 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 UBFD1O14562 309 aaKnown RBP14.08□□□□□ -0.16
RER1-207ENST00000488353 SEPT4O43236 478 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 TBC1D4O60343 1298 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 KPNA6O60684 536 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 ADAMTS4O75173 837 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 RFPL2O75678 378 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 F9P00740 461 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 CHRM3P20309 590 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 BDNFP23560 247 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 ARNTP27540 789 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 GRK3P35626 688 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 BMPR1AP36894 532 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 MGAT3Q09327 533 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 EPS8Q12929 822 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 RPS6KA2Q15349 733 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 PCSK7Q16549 785 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 TIGD5Q53EQ6 642 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 PYCR3Q53H96 274 aa14.08□□□□□ -0.16
RER1-207ENST00000488353 RAB41Q5JT25 222 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms