RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ZNF548Q8NEK5 533 aaPredicted RBP15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 IFT81Q8WYA0 676 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 SLC13A1Q9BZW2 595 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 ASXL3Q9C0F0 2248 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 CATSPERZQ9NTU4 200 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 ZDHHC3Q9NYG2 299 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 ZNHIT2Q9UHR6 403 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 GPSM3Q9Y4H4 160 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 FAM169AQ9Y6X4 670 aa15.3■□□□□ 0.04
RPUSD3-217ENST00000485705 H3BM21 787 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 CHUKO15111 745 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 CD3EAPO15446 510 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 GRID2O43424 1007 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 SGTAO43765 313 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 VEGFDO43915 354 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 PCDHGA12O60330 932 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 POLBP06746 335 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 ZNF883P0CG24 379 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 GIMD1P0DJR0 217 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 CTSEP14091 401 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 PAMP19021 973 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 MSH3P20585 1137 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 ECHS1P30084 290 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 AKT1P31749 480 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 BLKP51451 505 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 FASTKD1Q53R41 847 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 CCDC25Q86WR0 208 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 GALNT13Q8IUC8 556 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 ZNF547Q8IVP9 402 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 LRRC39Q96DD0 335 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 SGF29Q96ES7 293 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 OR2M4Q96R27 311 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 COPS8Q99627 209 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 C20orf96Q9NUD7 363 aaPredicted RBP15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 SPASTQ9UBP0 616 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 ZC3H7BQ9UGR2 993 aaKnown RBP15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 BTBD3Q9Y2F9 522 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 PRSS21Q9Y6M0 314 aa15.29■□□□□ 0.04
RPUSD3-217ENST00000485705 RP1P56715 2156 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 IGLV3-16A0A075B6K0 115 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 OR2AG2A6NM03 316 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 EIF3HO15372 352 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 YKT6O15498 198 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 FFAR2O15552 330 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 AQP9O43315 295 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 OR1I1O60431 355 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 SLU7O95391 586 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 AK4P27144 223 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 LIMK1P53667 647 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 GTF2H3Q13889 308 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 HLTFQ14527 1009 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 LONRF1Q17RB8 773 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 SPANXN3Q5MJ09 141 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 STEAP4Q687X5 459 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 NEPROQ6NW34 567 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 TMEM220Q6QAJ8 160 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 DBX2Q6ZNG2 339 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 NRROSQ86YC3 692 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 CLDN19Q8N6F1 224 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 OTUD6BQ8N6M0 293 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 DCUN1D1Q96GG9 259 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 TTC25Q96NG3 672 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 NAT9Q9BTE0 207 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 RMI1Q9H9A7 625 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 SLC23A2Q9UGH3 650 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 PCDHGB2Q9Y5G2 931 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 SPTBN4Q9H254 2564 aa15.28■□□□□ 0.04
RPUSD3-217ENST00000485705 TTC4O95801 387 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 ERVK-10P10266 1014 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 ACP5P13686 325 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 CTBSQ01459 385 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 DEFB133Q30KQ1 61 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 HSP90AA5PQ58FG0 334 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 CAPN12Q6ZSI9 719 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 CHST15Q7LFX5 561 aaPredicted RBP15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 C11orf96Q7Z7L8 435 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 LRRTM4Q86VH4 590 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 TRAPPC5Q8IUR0 188 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 DENND6AQ8IWF6 608 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 NETO1Q8TDF5 533 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 PYROXD1Q8WU10 500 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 C9orf72Q96LT7 481 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 CAMK1GQ96NX5 476 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 ZCCHC2Q9C0B9 1178 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 NFU1Q9UMS0 254 aa15.27■□□□□ 0.04
RPUSD3-217ENST00000485705 GPR89AB7ZAQ6 455 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 LMO7DNF2Z398 122 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 TRIM38O00635 465 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 YY2O15391 372 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 SH3BP5O60239 455 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 GPR89BP0CG08 455 aa15.26■□□□□ 0.03
RPUSD3-217ENST00000485705 ATP1B2P14415 290 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms