RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 NLGN3Q9NZ94 848 aa8.18□□□□□ -1.1
SF3A1-208ENST00000485618 ZC3H7BQ9UGR2 993 aaKnown RBP8.18□□□□□ -1.1
SF3A1-208ENST00000485618 CNOT6Q9ULM6 557 aaKnown RBP8.18□□□□□ -1.1
SF3A1-208ENST00000485618 SUFUQ9UMX1 484 aa8.18□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM98Q9Y2Y6 226 aa8.18□□□□□ -1.1
SF3A1-208ENST00000485618 RPS6KL1Q9Y6S9 549 aa8.18□□□□□ -1.1
SF3A1-208ENST00000485618 DOCK9Q9BZ29 2069 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ASPMQ8IZT6 3477 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SPAARA0A1B0GVQ0 90 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 TCRBV7S3A2A0A539 114 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CCDC162PA2VCL2 907 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 OR5K4A6NMS3 321 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SRRM3A6NNA2 597 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FADS2P1A8MWK0 482 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 KPNA5O15131 536 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CD3EAPO15446 510 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A9O60656 530 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 AVILO75366 819 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SPAG6O75602 509 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM63AO94886 807 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 VAPBO95292 243 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 LDOC1O95751 146 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SOD1P00441 154 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FTH1P02794 183 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 GSTA2P09210 222 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 OR56A5P0C7T3 313 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ATP1B2P14415 290 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A6P19224 532 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A1P22309 533 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A4P22310 534 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 MCM3P25205 808 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ACRV1P26436 265 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 IVDP26440 423 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A3P35503 534 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A5P35504 534 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 NSG1P42857 185 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 RPL21P46778 160 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CRADDP78560 199 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 BNC1Q01954 994 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 PLOD1Q02809 727 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 EIF2B5Q13144 721 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 HLTFQ14527 1009 aaKnown RBP eCLIP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ANKRD20A4Q4UJ75 823 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF542PQ5EBM4 170 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 PRAMEF14Q5SWL7 426 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 GPRC6AQ5T6X5 926 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ANKRD22Q5VYY1 191 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 KIAA0930Q6ICG6 404 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 NEPROQ6NW34 567 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ZCCHC8Q6NZY4 707 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ADGRG6Q86SQ4 1221 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 TMEM135Q86UB9 458 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 AMZ2Q86W34 360 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 NAXDQ8IW45 347 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 RBFAQ8N0V3 343 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CNPY4Q8N129 248 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF548Q8NEK5 533 aaPredicted RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 IFT81Q8WYA0 676 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 OR1E3Q8WZA6 343 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ART4Q93070 314 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 AGAP2Q99490 1192 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 TIMM29Q9BSF4 260 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FAM167BQ9BTA0 163 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 LRRC1Q9BTT6 524 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CARD6Q9BX69 1037 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 LGR4Q9BXB1 951 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CLPBQ9H078 707 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CCDC68Q9H2F9 335 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 DPH5Q9H2P9 285 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 L2HGDHQ9H9P8 463 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A7Q9HAW7 530 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A10Q9HAW8 530 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 UGT1A8Q9HAW9 530 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FGF22Q9HCT0 170 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 PPANQ9NQ55 473 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FSCN3Q9NQT6 498 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SYBUQ9NX95 663 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FTSJ1Q9UET6 329 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 KLK13Q9UKR3 277 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 NEUROG3Q9Y4Z2 214 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 KCTD3Q9Y597 815 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 SLCO1B1Q9Y6L6 691 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 FAM169AQ9Y6X4 670 aa8.17□□□□□ -1.1
SF3A1-208ENST00000485618 TNRC6BQ9UPQ9 1833 aaKnown RBP8.17□□□□□ -1.1
SF3A1-208ENST00000485618 CCDC78A2IDD5 438 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 AGAP14A8MT82 685 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 YY2O15391 372 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 TNFSF14O43557 240 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 GOT2P00505 430 aaKnown RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 TUBBP07437 444 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 ZNF8P17098 575 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-208ENST00000485618 IDSP22304 550 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 HALP42357 657 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 MAGEA3P43357 314 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 CLCNKAP51800 687 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 DAB2P98082 770 aa8.16□□□□□ -1.1
SF3A1-208ENST00000485618 XIAPP98170 497 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms