RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ZBED2Q9BTP6 218 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 EMILIN2Q9BXX0 1053 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 POMKQ9H5K3 350 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NEK6Q9HC98 313 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 VTI1BQ9UEU0 232 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 B3GNT3Q9Y2A9 372 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CCDC162PA2VCL2 907 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ICMTO60725 284 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 SEC14L2O76054 403 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 F2P00734 622 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 BMP2P12643 396 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 PTPN2P17706 415 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 GPX3P22352 226 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CCT8P50990 548 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 HNRNPFP52597 415 aaKnown RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 VBP1P61758 197 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CEP78Q5JTW2 689 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NEK5Q6P3R8 708 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 KDELC1Q6UW63 502 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CATSPER4Q7RTX7 472 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 R3HCC1LQ7Z5L2 792 aaKnown RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 AKAP14Q86UN6 197 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ZNF354CQ86Y25 554 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 GATAD2AQ86YP4 633 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 DDIASQ8IXT1 998 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ZNF683Q8IZ20 524 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NPLOC4Q8TAT6 608 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CALML6Q8TD86 181 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 EFHD2Q96C19 240 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 CDCA5Q96FF9 252 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 DMRTB1Q96MA1 342 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 FCRL5Q96RD9 977 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CDK5RAP1Q96SZ6 601 aaKnown RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 TUBB1Q9H4B7 451 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ZNF408Q9H9D4 720 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 HACD3Q9P035 362 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 IKZF3Q9UKT9 509 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TIMM13Q9Y5L4 95 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 H0YJX3 145 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NME4O00746 187 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 AP3D1O14617 1153 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TREHO43280 583 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NRP2O60462 931 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 KATNA1O75449 491 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 MBL2P11226 248 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 CYP2C18P33260 490 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 PLK1P53350 603 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 IST1P53990 364 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 FOXA1P55317 472 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 SETMARQ53H47 684 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 CCDC117Q8IWD4 279 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 CELF2-AS1Q8N7Q2 184 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 FAM83FQ8NEG4 500 aaPredicted RBP8.32□□□□□ -1.08
VAPB-205ENST00000476395 DNAJB3Q8WWF6 145 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 PTERQ96BW5 349 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TMEM209Q96SK2 561 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 TBL1YQ9BQ87 522 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 SLC39A8Q9C0K1 460 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 LRRC4Q9HBW1 653 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 CYP4F12Q9HCS2 524 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 ABCD2Q9UBJ2 740 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 SATB2Q9UPW6 733 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 NEUROG3Q9Y4Z2 214 aa8.32□□□□□ -1.08
VAPB-205ENST00000476395 HAS3O00219 553 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 NCAM2O15394 837 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 KPNA6O60684 536 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GPC4O75487 556 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CPNE6O95741 557 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PAHP00439 452 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 APOA4P06727 396 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PCID2Q5JVF3 399 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CLEC6AQ6EIG7 209 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PRR23CQ6ZRP0 262 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 LRRTM3Q86VH5 581 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ZCCHC7Q8N3Z6 543 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 ESX1Q8N693 406 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 OR2T34Q8NGX1 318 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 TADA1Q96BN2 335 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SEPHS2Q99611 448 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PARVBQ9HBI1 364 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MRM3Q9HC36 420 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 SPAG4Q9NPE6 437 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 AGPAT4Q9NRZ5 378 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 DDIT4Q9NX09 232 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ADPRHL2Q9NX46 363 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 GTSE1Q9NYZ3 720 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PTBP2Q9UKA9 531 aaKnown RBP8.31□□□□□ -1.08
VAPB-205ENST00000476395 ACOT9Q9Y305 439 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 SMIM35A0A1B0GVV1 85 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 DHRS12A0PJE2 317 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 ILVBLA1L0T0 632 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 LRRC14BA6NHZ5 514 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 PTGES3LE9PB15 166 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MRASO14807 208 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 MFN2O95140 757 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 CD4P01730 458 aa8.31□□□□□ -1.08
VAPB-205ENST00000476395 HADHAP40939 763 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms