RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RGS11O94810 467 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SEC31AO94979 1220 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ZBTB11O95625 1053 aaPredicted RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 PPP1R3DO95685 299 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 TFP02787 698 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SERPINB2P05120 415 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 EIF2S1P05198 315 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 HSP90AA1P07900 732 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SNRNP70P08621 437 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ZNF12P17014 697 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ALOX12P18054 663 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 EDN2P20800 178 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 CDAP32320 146 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 COMPP49747 757 aaPredicted RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 CLDN2P57739 230 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 TRAF3Q13114 568 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 MYBPHQ13203 477 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ITGADQ13349 1161 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 NEDD9Q14511 834 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 TCTN1Q2MV58 587 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 DPCR1Q3MIW9 517 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ATP13A5Q4VNC0 1218 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 WBP2NLQ6ICG8 309 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 C16orf54Q6UWD8 224 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 RBMXL3Q8N7X1 1067 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 FRMD1Q8N878 549 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ARHGEF2Q92974 986 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SMARCE1Q969G3 411 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 BICD1Q96G01 975 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 BBS4Q96RK4 519 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 CDX2Q99626 313 aaPredicted RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 CCDC68Q9H2F9 335 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SYNCQ9H7C4 482 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 DDX31Q9H8H2 851 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ZNF556Q9HAH1 456 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 SEPT11Q9NVA2 429 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 CISD1Q9NZ45 108 aaKnown RBP4.5□□□□□ -1.69
CNOT4-209ENST00000473470 TBC1D29Q9UFV1 150 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 MKLN1Q9UL63 735 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ADAM18Q9Y3Q7 739 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 PIEZO1Q92508 2521 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 NFAT5O94916 1531 aa4.5□□□□□ -1.69
CNOT4-209ENST00000473470 ANKRD31Q8N7Z5 1873 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 UNC79Q9P2D8 2635 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ZSWIM8A7E2V4 1837 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 AGAP14A8MT82 685 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 KLRF2D3W0D1 207 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 NPIPB11E5RHQ5 1161 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 TCERG1O14776 1098 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 BCAT2O15382 392 aaPredicted RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 MT-CYBP00156 380 aaPredicted RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 DDX5P17844 614 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 NFKBIAP25963 317 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 PSMB10P40306 273 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 GOLGA8DPQ0D2H9 430 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 CSTF3Q12996 717 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 CUL4AQ13619 759 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ACVR2BQ13705 512 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 TNFAIP1Q13829 316 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 DHX34Q14147 1143 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 MED22Q15528 200 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ALG11Q2TAA5 492 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 FAM69BQ5VUD6 431 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 CYP20A1Q6UW02 462 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 PRSS57Q6UWY2 283 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 IKBIPQ70UQ0 350 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ARMC9Q7Z3E5 817 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ARHGAP12Q8IWW6 846 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 TTC39CQ8N584 583 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 BEST2Q8NFU1 509 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 LILRB1Q8NHL6 650 aaPredicted RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 SPATA3Q8NHX4 192 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 SNRNP27Q8WVK2 155 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 PSPC1Q8WXF1 523 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 IL25Q9H293 177 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ASAH2Q9NR71 780 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 PLSCR4Q9NRQ2 329 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 HAUS2Q9NVX0 235 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 HAO1Q9UJM8 370 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 RABGAP1Q9Y3P9 1069 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 EIF3AQ14152 1382 aaKnown RBP4.49□□□□□ -1.69
CNOT4-209ENST00000473470 ANKRD26Q9UPS8 1709 aa4.49□□□□□ -1.69
CNOT4-209ENST00000473470 UTYO14607 1347 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 FAM237BA0A1B0GVD1 139 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 CPED1A4D0V7 1026 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 EIF3CLB5ME19 914 aaKnown RBP4.48□□□□□ -1.69
CNOT4-209ENST00000473470 AP3D1O14617 1153 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 KRT36O76013 467 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 MMP2P08253 660 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 ETFAP13804 333 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 CXCR3P49682 368 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 GNAQP50148 359 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 ERVFC1-1P60608 527 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 OLIG2Q13516 323 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 PPP2R5BQ15173 497 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 C9orf50Q5SZB4 431 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 TTI2Q6NXR4 508 aa4.48□□□□□ -1.69
CNOT4-209ENST00000473470 TMEM154Q6P9G4 183 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms