RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TCTN1Q2MV58 587 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 KIF19Q2TAC6 998 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 TRIM60Q495X7 471 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 AGKQ53H12 422 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 PIGGQ5H8A4 983 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 COQ5Q5HYK3 327 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 SAMD4BQ5PRF9 694 aaKnown RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 TCHHL1Q5QJ38 904 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 ZDHHC20Q5W0Z9 365 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 KANK2Q63ZY3 851 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 TMEM207Q6UWW9 146 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 IZUMO2Q6UXV1 221 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 HTR3DQ70Z44 454 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 FRA10AC1Q70Z53 315 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 C16orf59Q7L2K0 433 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 TAS2R42Q7RTR8 314 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 ADAMTSL2Q86TH1 951 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 PIM3Q86V86 326 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 KBTBD6Q86V97 674 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 HPS6Q86YV9 775 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 RBFAQ8N0V3 343 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MIER2Q8N344 545 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 TTC30BQ8N4P2 665 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MDGA1Q8NFP4 955 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MICAL1Q8TDZ2 1067 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 NRG4Q8WWG1 115 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 EXT2Q93063 718 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 PTERQ96BW5 349 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 ZNF689Q96CS4 500 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 CCDC124Q96CT7 223 aaKnown RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 PDLIM5Q96HC4 596 aaKnown RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 LRGUKQ96M69 825 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 BTBD9Q96Q07 612 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 HOPXQ9BPY8 73 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 FEM1AQ9BSK4 669 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 EFHD1Q9BUP0 239 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 VN1R3Q9BXE9 311 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 UNKQ9C0B0 810 aaKnown RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 RNF38Q9H0F5 515 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 ATP13A3Q9H7F0 1226 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MID1IP1Q9NPA3 183 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 SPAG4Q9NPE6 437 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 GKN1Q9NS71 199 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 POLR3BQ9NW08 1133 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 GID8Q9NWU2 228 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 GEMIN8Q9NWZ8 242 aaKnown RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 LHX3Q9UBR4 397 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 GNPTGQ9UJJ9 305 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 CROTQ9UKG9 612 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 SARDHQ9UL12 918 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 ZNF711Q9Y462 761 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MTF2Q9Y483 593 aaPredicted RBP7.57□□□□□ -1.2
CCDC171-205ENST00000472806 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
CCDC171-205ENST00000472806 MICAL3Q7RTP6 2002 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 A0A1W2PNR3 127 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 DYTNA2CJ06 578 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 C2orf78A6NCI8 922 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TMEM233B4DJY2 109 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 UBXN8O00124 270 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 BTN3A1O00481 513 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PRMT5O14744 637 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 MRASO14807 208 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CFLARO15519 480 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 BUD23O43709 281 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 FZD6O60353 706 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 NRP2O60462 931 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ECI2O75521 394 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 BCAS2O75934 225 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PGLSO95336 258 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 RPS17P08708 135 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CLTBP09497 229 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PIRTP0C851 137 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 UROSP10746 265 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 RAG1P15918 1043 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 KCNA5P22460 613 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 DDX6P26196 483 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 SERPINA4P29622 427 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 EEF1DP29692 281 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 HMGCLP35914 325 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CSKP41240 450 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 MRPL19P49406 292 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PGGT1BP53609 377 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TNP2Q05952 138 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 FOXM1Q08050 763 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ZNF423Q2M1K9 1284 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TTLL9Q3SXZ7 439 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 GPR33Q49SQ1 333 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PPM1LQ5SGD2 360 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 IRAK1BP1Q5VVH5 260 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TMEM198Q66K66 360 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 REP15Q6BDI9 236 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PTRHD1Q6GMV3 140 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 GRAMD4Q6IC98 578 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 OGFOD2Q6N063 350 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 METTL2BQ6P1Q9 378 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PAQR3Q6TCH7 311 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 LARP4Q71RC2 724 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 RTL10Q7L3V2 364 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 SNX20Q7Z614 316 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms