RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 PRSS42Q7Z5A4 293 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 RAB43Q86YS6 212 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 HPS6Q86YV9 775 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ARHGAP12Q8IWW6 846 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PGBD5Q8N414 524 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ATPAF2Q8N5M1 289 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ST6GALNAC3Q8NDV1 305 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 LPCAT1Q8NF37 534 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 GDAP1Q8TB36 358 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 CPT1BQ92523 772 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TM9SF4Q92544 642 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 CENPIQ92674 756 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 SNX21Q969T3 373 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PCMTD1Q96MG8 357 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TRAPPC9Q96Q05 1148 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PSKH2Q96QS6 385 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 NUDCD1Q96RS6 583 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 KCTD15Q96SI1 283 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 MAP3K3Q99759 626 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 SPATA16Q9BXB7 569 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TLR10Q9BXR5 811 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 FANCEQ9HB96 536 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 NLRC4Q9NPP4 1024 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 KCND1Q9NSA2 647 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 VPS18Q9P253 973 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF624Q9P2J8 865 aaPredicted RBP6.75□□□□□ -1.33
HDAC1-204ENST00000471488 ATXN10Q9UBB4 475 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 FAM8A1Q9UBU6 413 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 TCFL5Q9UL49 500 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 PSMD13Q9UNM6 376 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 CHKBQ9Y259 395 aa6.75□□□□□ -1.33
HDAC1-204ENST00000471488 SETD2Q9BYW2 2564 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CELSR1Q9NYQ6 3014 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 TRGV8A0A0C4DH27 118 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 HEATR9A2RTY3 570 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 FADS2P1A8MWK0 482 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 TMCO5BA8MYB1 307 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 C9J4A7 227 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 F8VZ95 297 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 MEN1O00255 615 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 NUAK1O60285 661 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ALOX12BO75342 701 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CEACAM4O75871 244 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 LCA5LO95447 670 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CALB1P05937 261 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 XRCC1P18887 633 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CYP2A7P20853 494 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 IDSP22304 550 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 IL4RP24394 825 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ITGA3P26006 1051 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 PBLDP30039 288 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF143P52747 638 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 GSDMDP57764 484 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 RPL7AP62424 266 aaKnown RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 HSD11B2P80365 405 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 FMO1Q01740 532 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CDR2Q01850 454 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SLC9A5Q14940 896 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 MAN2A1Q16706 1144 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 VWA3BQ502W6 1294 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ZNF569Q5MCW4 686 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 MARC1Q5VT66 337 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 KLHDC7AQ5VTJ3 777 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 IZUMO3Q5VZ72 239 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CUZD1Q86UP6 607 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 LRRTM4Q86VH4 590 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 TRAPPC5Q8IUR0 188 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 GALNT16Q8N428 558 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ZBTB2Q8N680 514 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SLC38A9Q8NBW4 561 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CCHCR1Q8TD31 782 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 GRHL3Q8TE85 626 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 UBXN4Q92575 508 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 N4BP2L2Q92802 583 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 COX14Q96I36 57 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 GBP5Q96PP8 586 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 TUBGCP2Q9BSJ2 902 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 CNPY3Q9BT09 278 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SNRNP25Q9BV90 132 aaKnown RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 STK33Q9BYT3 514 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 NDST4Q9H3R1 872 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 FAM83DQ9H4H8 585 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 RMI1Q9H9A7 625 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ZBTB20Q9HC78 741 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 FAM207AQ9NSI2 230 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 PKD2L2Q9NZM6 624 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SUCOQ9UBS9 1254 aaKnown RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 SLC23A2Q9UGH3 650 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
HDAC1-204ENST00000471488 RWDD2AQ9UIY3 292 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
HDAC1-204ENST00000471488 APCP25054 2843 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 A0A0J9YYE9 177 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 A0A1B0GUH1 482 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 GOLGA6L3A6NEY3 463 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 SIGLEC16A6NMB1 481 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 TMEM150CB9EJG8 249 aa6.73□□□□□ -1.33
HDAC1-204ENST00000471488 KMOO15229 486 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms