RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 SPO11Q9Y5K1 396 aa12.34□□□□□ -0.43
CCNL1-213ENST00000471044 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 PJA2O43164 708 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 KLK10O43240 276 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 GRID2O43424 1007 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 SLC25A14O95258 325 aaPredicted RBP12.33□□□□□ -0.44
CCNL1-213ENST00000471044 EPOP01588 193 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 JMJD7P0C870 316 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 BPIP17213 487 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 CD1CP29017 333 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 ALDH4A1P30038 563 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 PTGIRP43119 386 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 CLCNKAP51800 687 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 VAV2P52735 878 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 WNT3AP56704 352 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 MPP3Q13368 585 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 ALS2CLQ60I27 953 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 SFRP1Q8N474 314 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 RNF217Q8TC41 542 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 SLC37A2Q8TED4 501 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 GLYATL1Q969I3 302 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 PLEKHG4BQ96PX9 1271 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 SEMA6CQ9H3T2 930 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 TRABDQ9H4I3 376 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 TRIM39Q9HCM9 518 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 ACSL6Q9UKU0 697 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 TRHDEQ9UKU6 1024 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 DUSP10Q9Y6W6 482 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 SDK2Q58EX2 2172 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
CCNL1-213ENST00000471044 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 CCDC66A2RUB6 948 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 H7C0C1 242 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 AURKAO14965 403 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 CHUKO15111 745 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 EML2O95834 649 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ACP5P13686 325 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 HGFP14210 728 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 SLC2A4P14672 509 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ZNF8P17098 575 aaPredicted RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ITIH1P19827 911 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 RBL1P28749 1068 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 SLC5A2P31639 672 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 PTPN7P35236 360 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 HMGCLP35914 325 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ATP5OP48047 213 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 LIMK2P53671 638 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 NAP1L1P55209 391 aaKnown RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TMPRSS3P57727 454 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 CXADRP78310 365 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 GPLD1P80108 840 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TRA2AQ13595 282 aaKnown RBP eCLIP12.32□□□□□ -0.441e-7■■■□□ 15.7
CCNL1-213ENST00000471044 AMZ1Q400G9 498 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 IYDQ6PHW0 289 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ZNF574Q6ZN55 896 aaPredicted RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ADGRG6Q86SQ4 1221 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 PHYKPLQ8IUZ5 450 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 DTX3LQ8TDB6 740 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 OXNAD1Q96HP4 312 aaPredicted RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 VPS35Q96QK1 796 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 CMKLR1Q99788 373 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 NUDT22Q9BRQ3 303 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 HERPUD2Q9BSE4 406 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 HEMGNQ9BXL5 484 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 OSBPL8Q9BZF1 889 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 LACRTQ9GZZ8 138 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 RDH14Q9HBH5 336 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 PRM3Q9NNZ6 103 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 ARFGAP3Q9NP61 516 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 SARS2Q9NP81 518 aaKnown RBP12.32□□□□□ -0.44
CCNL1-213ENST00000471044 HACD3Q9P035 362 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TBC1D29Q9UFV1 150 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 PISDQ9UG56 409 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 KCNK6Q9Y257 313 aa12.32□□□□□ -0.44
CCNL1-213ENST00000471044 TRBV23OR9-2A0A075B6M9 112 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 IGHV5-10-1A0A0J9YXX1 117 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 A6NCN8 305 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 OR5K4A6NMS3 321 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 HGSO14964 777 aaPredicted RBP12.31□□□□□ -0.44
CCNL1-213ENST00000471044 NVLO15381 856 aaKnown RBP12.31□□□□□ -0.44
CCNL1-213ENST00000471044 VEGFDO43915 354 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 SLC4A1P02730 911 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 F3P13726 295 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 HLA-DPA1P20036 260 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 ETV5P41161 510 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 CHRNA4P43681 627 aa12.31□□□□□ -0.44
CCNL1-213ENST00000471044 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
CCNL1-213ENST00000471044 GEMP55040 296 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms