RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SYNPOQ8N3V7 929 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PPM1NQ8N819 430 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 C2CD4AQ8NCU7 369 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 OR6P1Q8NGX9 317 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 OR6K2Q8NGY2 324 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 OR2W6PQ8NHA6 318 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 TTC8Q8TAM2 541 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PIP4K2CQ8TBX8 421 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 GRIN3AQ8TCU5 1115 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 STK35Q8TDR2 534 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 MRRFQ96E11 262 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CHFRQ96EP1 664 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 MFSD3Q96ES6 412 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 WDR89Q96FK6 387 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 NELL2Q99435 816 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 DHRS4Q9BTZ2 278 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CCDC86Q9H6F5 360 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 BCCIPQ9P287 314 aaKnown RBP eCLIP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 NCDNQ9UBB6 729 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 APPL1Q9UKG1 709 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PPM1HQ9ULR3 514 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CORO1CQ9ULV4 474 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SCML1Q9UN30 329 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SMG5Q9UPR3 1016 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 STON1Q9Y6Q2 735 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 C1orf232A0A0U1RR37 186 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SMIM23A6NLE4 172 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 C16orf96A6NNT2 1141 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 F8W8V4 182 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 K7EQS6 105 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PSMD11O00231 422 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 GJB3O75712 270 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM155BO75949 473 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 IL1BP01584 269 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 MT-ND3P03897 115 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TDGF1P13385 188 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 C5AR1P21730 350 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ARNTP27540 789 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 MAP4P27816 1152 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SLC8A1P32418 973 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 IL12RB1P42701 662 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SLCO1A2P46721 670 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SOX9P48436 509 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ARCN1P48444 511 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TTPAP49638 278 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 NEK3P51956 506 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CSTF1Q05048 431 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ZBTB16Q05516 673 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 COL9A2Q14055 689 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 LRRC32Q14392 662 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PON2Q15165 354 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TMED2Q15363 201 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 MLF2Q15773 248 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 GPR33Q49SQ1 333 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SLC44A4Q53GD3 710 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FASTKD1Q53R41 847 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 HSP90AA5PQ58FG0 334 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TEDDM1Q5T9Z0 273 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 LYPLAL1Q5VWZ2 237 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF776Q68DI1 518 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF470Q6ECI4 717 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FSTL4Q6MZW2 842 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CDPF1Q6NVV7 123 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ESRP1Q6NXG1 681 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FBXL19Q6PCT2 694 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TRMT10BQ6PF06 316 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CERS6Q6ZMG9 384 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF852Q6ZMS4 543 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TTC7BQ86TV6 843 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 STK40Q8N2I9 435 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 TTC30BQ8N4P2 665 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 OTUD6BQ8N6M0 293 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CHST14Q8NCH0 376 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 GPR150Q8NGU9 434 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 OR4L1Q8NH43 312 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM76AQ8TAV0 307 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 DTX3LQ8TDB6 740 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 ACMSDQ8TDX5 336 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FBLIM1Q8WUP2 373 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 DCAKDQ8WVC6 231 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FAM3CQ92520 227 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 HDAC10Q969S8 669 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CLDN23Q96B33 292 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CDKN2AIPNLQ96HQ2 116 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CABS1Q96KC9 395 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 SMC6Q96SB8 1091 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 GABRG3Q99928 467 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 HDAC8Q9BY41 377 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 OSBPL6Q9BZF3 934 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 RSPH9Q9H1X1 276 aaPredicted RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 RHOJQ9H4E5 214 aa6.6□□□□□ -1.35
VAMP3-202ENST00000470357 CNOT10Q9H9A5 744 aaKnown RBP6.6□□□□□ -1.35
VAMP3-202ENST00000470357 PLAC1Q9HBJ0 212 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms