RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DCUN1D1Q96GG9 259 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 NUSAP1Q9BXS6 441 aaKnown RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 VPS37BQ9H9H4 285 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 FGF22Q9HCT0 170 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 IARS2Q9NSE4 1012 aaKnown RBP15.01□□□□□ -0.01
NPHP4-205ENST00000466897 IL1RAPL1Q9NZN1 696 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 ZFATQ9P243 1243 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 KLQ9UEF7 1012 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 FBXO5Q9UKT4 447 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 DMDP11532 3685 aa15.01□□□□□ -0.01
NPHP4-205ENST00000466897 CCDC151A5D8V7 595 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 PRMT5O14744 637 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 KHNYNO15037 678 aaKnown RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 YKT6O15498 198 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 RIPK2O43353 540 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 FOXD2O60548 495 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 NDUFS3O75489 264 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 CDK14O94921 469 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 RASGRP1O95267 797 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 S1PR4O95977 384 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 CSF2P04141 144 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 CFIP05156 583 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 GSTM1P09488 218 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 ATP1B2P14415 290 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 ZNF8P17098 575 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 LEPRP48357 1165 aaKnown RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 RXRGP48443 463 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 HK3P52790 923 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 SRP54P61011 504 aaKnown RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 GSTM4Q03013 218 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 PPARDQ03181 441 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 BRD3Q15059 726 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 ALG11Q2TAA5 492 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 KIF19Q2TAC6 998 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 MICALCLQ6ZW33 695 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 MARK2Q7KZI7 788 aaKnown RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 MREGQ8N565 214 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 OTUD6BQ8N6M0 293 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 RASGEF1AQ8N9B8 481 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 FBF1Q8TES7 1133 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 OR1E3Q8WZA6 343 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 LPGAT1Q92604 370 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 LINC00615Q96LM1 132 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 OR2AG1Q9H205 316 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 P2RY12Q9H244 342 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 ACSS3Q9H6R3 686 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 PPANQ9NQ55 473 aaKnown RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 CORO1CQ9ULV4 474 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 PCDHB1Q9Y5F3 818 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 SNX11Q9Y5W9 270 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 DNMT3AQ9Y6K1 912 aaPredicted RBP15□□□□□ -0.01
NPHP4-205ENST00000466897 OTOGLQ3ZCN5 2332 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 LAMA1P25391 3075 aa15□□□□□ -0.01
NPHP4-205ENST00000466897 A0A087WUV0 522 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-205ENST00000466897 PATE3B3GLJ2 98 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ARHGAP33O14559 1287 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 GRID2O43424 1007 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 SGTAO43765 313 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 KCNJ13O60928 360 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 MTX2O75431 263 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ACSL3O95573 720 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ASMTLO95671 621 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CER1O95813 267 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ESR1P03372 595 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 PRLHRP49683 370 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 LRP8Q14114 963 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CSRP2Q16527 193 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 PYCR3Q53H96 274 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CAPN12Q6ZSI9 719 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 LRRTM4Q86VH4 590 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 DENND6AQ8IWF6 608 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CNPY4Q8N129 248 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 SDR16C5Q8N3Y7 309 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 PDXPQ96GD0 296 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CYTH2Q99418 400 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ELF4Q99607 663 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-205ENST00000466897 MCMBPQ9BTE3 642 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 BOCQ9BWV1 1114 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 CLPBQ9H078 707 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 EPB41L4BQ9H329 900 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 ARFGAP3Q9NP61 516 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 TRNAU1APQ9NX07 287 aaKnown RBP14.99□□□□□ -0.01
NPHP4-205ENST00000466897 NCDNQ9UBB6 729 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 FETUBQ9UGM5 382 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 RABGEF1Q9UJ41 708 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 PNMA8BQ9ULN7 279 aaPredicted RBP14.99□□□□□ -0.01
NPHP4-205ENST00000466897 SUFUQ9UMX1 484 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 TMEM98Q9Y2Y6 226 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 COMMD10Q9Y6G5 202 aa14.99□□□□□ -0.01
NPHP4-205ENST00000466897 H3BM21 787 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 H3BMM5 538 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 KMOO15229 486 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 TNFP01375 233 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 FUCA1P04066 466 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 POLD2P49005 469 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 ARRB1P49407 418 aaPredicted RBP14.98□□□□□ -0.01
NPHP4-205ENST00000466897 CSE1LP55060 971 aaKnown RBP14.98□□□□□ -0.01
NPHP4-205ENST00000466897 HNRNPKP61978 463 aaKnown RBP eCLIP14.98□□□□□ -0.01
NPHP4-205ENST00000466897 IRX4P78413 519 aa14.98□□□□□ -0.01
NPHP4-205ENST00000466897 CTBP1Q13363 440 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms