RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 DTNBP1Q96EV8 351 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 SLC2A13Q96QE2 648 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 CPXM1Q96SM3 734 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 FOXB1Q99853 325 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PRMT1Q99873 361 aaKnown RBP5.89□□□□□ -1.47
SSBP1-204ENST00000465167 SH3GL2Q99962 352 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 MYOCQ99972 504 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 RHOXF2Q9BQY4 288 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 FEM1AQ9BSK4 669 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 C1QTNF7Q9BXJ2 289 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 TSGA10Q9BZW7 698 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 TKTL2Q9H0I9 626 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 ABCG4Q9H172 646 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 POFUT1Q9H488 388 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 HAUS4Q9H6D7 363 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 IL36AQ9UHA7 158 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 IPO11Q9UI26 975 aaKnown RBP5.89□□□□□ -1.47
SSBP1-204ENST00000465167 DNAJC12Q9UKB3 198 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 CLCA2Q9UQC9 943 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PCDHGA9Q9Y5G4 932 aaKnown RBP5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PCDHGA8Q9Y5G5 932 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PCDHGA7Q9Y5G6 932 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PCDHGA6Q9Y5G7 932 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 PCDHGA3Q9Y5H0 932 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 HS3ST4Q9Y661 456 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 SLCO1B1Q9Y6L6 691 aa5.89□□□□□ -1.47
SSBP1-204ENST00000465167 MYLKQ15746 1914 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 MYOCOSA0A1B0GUC4 107 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 A0A1W2PR77 199 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CFAP73A6NFT4 308 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 HMGB1P1B2RPK0 211 aaPredicted RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SLC31A1O15431 190 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 FFAR2O15552 330 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 AHCYL1O43865 530 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SRGAP2O75044 1071 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SDC3O75056 442 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 MFAP3LO75121 409 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 ERBB2P04626 1255 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 WNT1P04628 370 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 GSTA1P08263 222 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 THEGLP0DJG4 465 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 ENPP1P22413 925 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 RRM1P23921 792 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 ACP1P24666 158 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 PON1P27169 355 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CHRNA3P32297 505 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 NEK3P51956 506 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 NAP1L1P55209 391 aaKnown RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 HNRNPKP61978 463 aaKnown RBP eCLIP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 RPS21P63220 83 aaKnown RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 PITX1P78337 314 aaPredicted RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 RAD51Q06609 339 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CNTN1Q12860 1018 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TARDBPQ13148 414 aaKnown RBP eCLIP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SGCGQ13326 291 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 KCNJ12Q14500 433 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 MYBPC3Q14896 1274 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TAF5Q15542 800 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 GLE1Q53GS7 698 aaKnown RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CT83Q5H943 113 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 PRAMEF14Q5SWL7 426 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CCDC181Q5TID7 509 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 AGBL4Q5VU57 503 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 VASNQ6EMK4 673 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 KIAA1161Q6NSJ0 714 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TIGD7Q6NT04 549 aaPredicted RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 C22orf39Q6P5X5 142 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 GJB7Q6PEY0 223 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 OLFML1Q6UWY5 402 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 ZNF783Q6ZMS7 281 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 KANSL1Q7Z3B3 1105 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TFAP2DQ7Z6R9 452 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 HORMAD1Q86X24 394 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 ERICH1Q86X53 443 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CCDC170Q8IYT3 715 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SLC35F6Q8N357 371 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 RYBPQ8N488 228 aaPredicted RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 PCDH20Q8N6Y1 951 aaKnown RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 PAF1Q8N7H5 531 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TMIEQ8NEW7 156 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CAVIN3Q969G5 261 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 IQCDQ96DY2 449 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 MYEOVQ96EZ4 313 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 LGMNQ99538 433 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 SELENOOQ9BVL4 669 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 USP29Q9HBJ7 922 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 TCF7L1Q9HCS4 588 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 CCM2LQ9NUG4 571 aaPredicted RBP5.88□□□□□ -1.47
SSBP1-204ENST00000465167 DNAJC28Q9NX36 388 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 MKS1Q9NXB0 559 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 GALNT8Q9NY28 637 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 NCKIPSDQ9NZQ3 722 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 VPS51Q9UID3 782 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 HS3ST2Q9Y278 367 aa5.88□□□□□ -1.47
SSBP1-204ENST00000465167 A0A087WV48 116 aa5.87□□□□□ -1.47
SSBP1-204ENST00000465167 PRSS38A1L453 326 aa5.87□□□□□ -1.47
SSBP1-204ENST00000465167 GOLGA6L10A6NI86 522 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms