RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 DNAJC16Q9Y2G8 782 aa12.79□□□□□ -0.36
XRN1-203ENST00000463916 IGHV1OR21-1A0A087WYE8 117 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 KMOO15229 486 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 AP2A1O95782 977 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 F3P13726 295 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 ITPKBP27987 946 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 GPR3P46089 330 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 ZNF140P52738 457 aaPredicted RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 P3H1Q32P28 736 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 DDHD1Q8NEL9 900 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 SNIP1Q8TAD8 396 aaKnown RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 LIN37Q96GY3 246 aaPredicted RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 CRELD1Q96HD1 420 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 PPP1R2P1Q96PQ5 205 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 OSGEPL1Q9H4B0 414 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 ZNF148Q9UQR1 794 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
XRN1-203ENST00000463916 SMG1Q96Q15 3661 aaKnown RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 ZNF106Q9H2Y7 1883 aaKnown RBP12.78□□□□□ -0.36
XRN1-203ENST00000463916 CCDC187A0A096LP49 1063 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 ZNF189O75820 626 aaPredicted RBP12.77□□□□□ -0.36
XRN1-203ENST00000463916 SRP72O76094 671 aaKnown RBP12.77□□□□□ -0.36
XRN1-203ENST00000463916 CPNE6O95741 557 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 IFNB1P01574 187 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 BRAFP15056 766 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 RPL10P27635 214 aaKnown RBP12.77□□□□□ -0.36
XRN1-203ENST00000463916 CCKBRP32239 447 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 CSF2RBP32927 897 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 CLCNKAP51800 687 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 NFATC2Q13469 925 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 BIRC2Q13490 618 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 SEPT7Q16181 437 aaKnown RBP12.77□□□□□ -0.36
XRN1-203ENST00000463916 INSCQ1MX18 579 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 PIM3Q86V86 326 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 TRAPPC5Q8IUR0 188 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 WDR36Q8NI36 951 aaKnown RBP12.77□□□□□ -0.36
XRN1-203ENST00000463916 KCNF1Q9H3M0 494 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 FAM96AQ9H5X1 160 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 ETNK1Q9HBU6 452 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 SMOXQ9NWM0 555 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 TMEM9Q9P0T7 183 aa12.77□□□□□ -0.36
XRN1-203ENST00000463916 PRAMEF33A0A0G2JMD5 474 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 OR2AG2A6NM03 316 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 TNFSF15O95150 251 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 CRTAMO95727 393 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 FGGP02679 453 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 MPSTP25325 297 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 ACTN2P35609 894 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 GRIA1P42261 906 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 CDKN1CP49918 316 aaPredicted RBP12.77□□□□□ -0.37
XRN1-203ENST00000463916 HHEXQ03014 270 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 ITGA9Q13797 1035 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 POU6F1Q14863 301 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 COL28A1Q2UY09 1125 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 MAP9Q49MG5 647 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 LDLRAP1Q5SW96 308 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 RAB11FIP2Q7L804 512 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 LSMEM2Q8N112 164 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 RCBTB1Q8NDN9 531 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 TIMM29Q9BSF4 260 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 FRMD8P1Q9BZ68 369 aaPredicted RBP12.77□□□□□ -0.37
XRN1-203ENST00000463916 ASB8Q9H765 288 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 SARS2Q9NP81 518 aaKnown RBP12.77□□□□□ -0.37
XRN1-203ENST00000463916 KCNK4Q9NYG8 393 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 ZNF624Q9P2J8 865 aaPredicted RBP12.77□□□□□ -0.37
XRN1-203ENST00000463916 ADAMTS20P59510 1910 aa12.77□□□□□ -0.37
XRN1-203ENST00000463916 ATMQ13315 3056 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 AGAP14A8MT82 685 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 CDRT15L2A8MXV6 281 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 PLD2O14939 933 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 PRSS56P0CW18 603 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 DRG2P55039 364 aaKnown RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 C16orf72Q14CZ0 275 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 CCNG2Q16589 344 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 PHF19Q5T6S3 580 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 TMEM220Q6QAJ8 160 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 IGF2-ASQ6U949 168 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 FAM83HQ6ZRV2 1179 aaPredicted RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 DET1Q7L5Y6 550 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 BEND7Q8N7W2 519 aaPredicted RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 OR52K1Q8NGK4 314 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 NAF1Q96HR8 494 aaKnown RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 DNAJC1Q96KC8 554 aaKnown RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
XRN1-203ENST00000463916 TTC25Q96NG3 672 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 SLC38A3Q99624 504 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 CPNE7Q9UBL6 633 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 WDR37Q9Y2I8 494 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
XRN1-203ENST00000463916 SGTAO43765 313 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms