RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CATSPERZQ9NTU4 200 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 TMPRSS11EQ9UL52 423 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 GPR34Q9UPC5 381 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 WDR87Q6ZQQ6 2873 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 COL5A1P20908 1838 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 SIGLEC6O43699 453 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 KCNJ13O60928 360 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 CBFA2T3O75081 653 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 TTC4O95801 387 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 FUCA1P04066 466 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 ACP5P13686 325 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 NMBRP28336 390 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 ACTR1BP42025 376 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 ACTR1AP61163 376 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 CTBSQ01459 385 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 TCEA2Q15560 299 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 GLE1Q53GS7 698 aaKnown RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF648Q5T619 568 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 KCTD16Q68DU8 428 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 DUPD1Q68J44 220 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 KIAA0930Q6ICG6 404 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 MRNIPQ6NTE8 343 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 PSAPL1Q6NUJ1 521 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 CRTC3Q6UUV7 619 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 MPP5Q8N3R9 675 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 OTUD6BQ8N6M0 293 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 FAM181AQ8N9Y4 354 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 FAM46DQ8NEK8 389 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF669Q96BR6 464 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 TIMM29Q9BSF4 260 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 DPEP2Q9H4A9 486 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 DNMT3AQ9Y6K1 912 aaPredicted RBP19.54■□□□□ 0.72
COL9A3-204ENST00000463487 RPS6KL1Q9Y6S9 549 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 CEP250Q9BV73 2442 aa19.54■□□□□ 0.72
COL9A3-204ENST00000463487 DCDC2BA2VCK2 349 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 ESPNB1AK53 854 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 TRIM38O00635 465 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF500O60304 480 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 USP1O94782 785 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 KCNK5O95279 499 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 VAPBO95292 243 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 ATP1B2P14415 290 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 SLC2A4P14672 509 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 CKMT2P17540 419 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 PGAM1P18669 254 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 PMLP29590 882 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 FOXN2P32314 431 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 TTPAP49638 278 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 MRPS25P82663 173 aaKnown RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 NR0B2Q15466 257 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 BBS9Q3SYG4 887 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 KHDC1Q4VXA5 237 aaKnown RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 SLC30A9Q6PML9 568 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 SDCCAG8Q86SQ7 713 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 GLRX5Q86SX6 157 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 ARL10Q8N8L6 244 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 BAHD1Q8TBE0 780 aaPredicted RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 MFSD3Q96ES6 412 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 TAAR2Q9P1P5 351 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 APOBEC2Q9Y235 224 aaKnown RBP19.53■□□□□ 0.72
COL9A3-204ENST00000463487 PRKAB1Q9Y478 270 aa19.53■□□□□ 0.72
COL9A3-204ENST00000463487 OR51F1A6NGY5 319 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 GIMD1P0DJR0 217 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF7P17097 686 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-204ENST00000463487 NSG1P42857 185 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 DRG2P55039 364 aaKnown RBP19.52■□□□□ 0.72
COL9A3-204ENST00000463487 SIM1P81133 766 aaPredicted RBP19.52■□□□□ 0.72
COL9A3-204ENST00000463487 DHX9Q08211 1270 aaKnown RBP19.52■□□□□ 0.72
COL9A3-204ENST00000463487 BIRC2Q13490 618 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 ANKRD20A4Q4UJ75 823 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 TMEM220Q6QAJ8 160 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 PACS1Q6VY07 963 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 CENPUQ71F23 418 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 DET1Q7L5Y6 550 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 DGLUCYQ7Z3D6 616 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 TMEM135Q86UB9 458 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 RASGEF1AQ8N9B8 481 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.52■□□□□ 0.72
COL9A3-204ENST00000463487 OR6C4Q8NGE1 309 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 CALML6Q8TD86 181 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 SIGLEC10Q96LC7 697 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 BOCQ9BWV1 1114 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 OSGEPL1Q9H4B0 414 aa19.52■□□□□ 0.72
COL9A3-204ENST00000463487 IGLV3-16A0A075B6K0 115 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 OR2AG2A6NM03 316 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 B4DGG1 531 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 CD3EAPO15446 510 aaKnown RBP19.51■□□□□ 0.71
COL9A3-204ENST00000463487 AP2A2O94973 939 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 CELA2BP08218 269 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-204ENST00000463487 GSTM1P09488 218 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 CDK4P11802 303 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 AK4P27144 223 aaPredicted RBP19.51■□□□□ 0.71
COL9A3-204ENST00000463487 GSTM4Q03013 218 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 THOC5Q13769 683 aaKnown RBP19.51■□□□□ 0.71
COL9A3-204ENST00000463487 DBN1Q16643 649 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 LONRF1Q17RB8 773 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 PROX2Q3B8N5 592 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 BCL7AQ4VC05 210 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 FNBP1LQ5T0N5 605 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 RNF187Q5TA31 235 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms