RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LRRC61Q9BV99 259 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 FAM129AQ9BZQ8 928 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 TCEAL2Q9H3H9 227 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 FAM114A2Q9NRY5 505 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 ZDHHC3Q9NYG2 299 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 C1QTNF9BB2RNN3 333 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 GPR39O43194 453 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 PROS1P07225 676 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 C1QTNF9P0C862 333 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 ALPPL2P10696 532 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 ZNF8P17098 575 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-209ENST00000460573 PGAM1P18669 254 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 ACRV1P26436 265 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 GRK6P43250 576 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 SLC7A5Q01650 507 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 LRP8Q14114 963 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 AARS2Q5JTZ9 985 aaKnown RBP22.19■■□□□ 1.14
C9orf3-209ENST00000460573 KCTD16Q68DU8 428 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 LVRNQ6Q4G3 990 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 MARK2Q7KZI7 788 aaKnown RBP22.19■■□□□ 1.14
C9orf3-209ENST00000460573 GKN2Q86XP6 184 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 GATAD2AQ86YP4 633 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 SCG3Q8WXD2 468 aaKnown RBP22.19■■□□□ 1.14
C9orf3-209ENST00000460573 DCUN1D1Q96GG9 259 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 OR2M4Q96R27 311 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 DUSP23Q9BVJ7 150 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 FOXP3Q9BZS1 431 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 FAM96AQ9H5X1 160 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 ARFGAP3Q9NP61 516 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 ZNHIT2Q9UHR6 403 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 GPR34Q9UPC5 381 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 RPS6KL1Q9Y6S9 549 aa22.19■■□□□ 1.14
C9orf3-209ENST00000460573 LRP4O75096 1905 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 BHMG1C9JSJ3 638 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 E7ESA3 106 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 TPP1O14773 563 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 KMOO15229 486 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 EIF3HO15372 352 aaKnown RBP eCLIP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 GRID2O43424 1007 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 MTX2O75431 263 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 FTH1P19P0C7X4 201 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 AKT1P31749 480 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 GUCY2DQ02846 1103 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 ILF3Q12906 894 aaKnown RBP eCLIP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 ITIH4Q14624 930 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 MSS51Q4VC12 460 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 CES3Q6UWW8 571 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 CENPUQ71F23 418 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 SERPINA9Q86WD7 417 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 AGGF1Q8N302 714 aaeCLIP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 GPBAR1Q8TDU6 330 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 ZNF669Q96BR6 464 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 GSDMCQ9BYG8 508 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 PHACTR1Q9C0D0 580 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 TMEM168Q9H0V1 697 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 UCKL1Q9NWZ5 548 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 NLGN3Q9NZ94 848 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 GPSM3Q9Y4H4 160 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 NEUROG3Q9Y4Z2 214 aa22.18■■□□□ 1.14
C9orf3-209ENST00000460573 DNMT3AQ9Y6K1 912 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-209ENST00000460573 IGLV3-16A0A075B6K0 115 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 OR51F1A6NGY5 319 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 LMO7DNF2Z398 122 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 KRT37O76014 449 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 VAPBO95292 243 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 ANXA6P08133 673 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CA5AP35218 305 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 PLTPP55058 493 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 KHDC1Q4VXA5 237 aaKnown RBP22.17■■□□□ 1.14
C9orf3-209ENST00000460573 ZNF648Q5T619 568 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-209ENST00000460573 LRRTM4Q86VH4 590 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 PIANPQ8IYJ0 282 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CHCHD4Q8N4Q1 142 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CDC6Q99741 560 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CLPBQ9H078 707 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 EPB41L5Q9HCM4 733 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CATSPERZQ9NTU4 200 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 PCOLCE2Q9UKZ9 415 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 DOLKQ9UPQ8 538 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 TEX264Q9Y6I9 313 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 FAM169AQ9Y6X4 670 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 CHD8Q9HCK8 2581 aa22.17■■□□□ 1.14
C9orf3-209ENST00000460573 ZCWPW2A0A1B0GU75 182 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 PFDN6O15212 129 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 CD3EAPO15446 510 aaKnown RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 KCNJ13O60928 360 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 ATP1B2P14415 290 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 ELK3P41970 407 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 ARCN1P48444 511 aaKnown RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 CDKN1CP49918 316 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 PDIA2Q13087 525 aaKnown RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 C1orf61Q13536 156 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 SPANXN3Q5MJ09 141 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 MRNIPQ6NTE8 343 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 SDCCAG8Q86SQ7 713 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 LMNTD2Q8IXW0 634 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 OR4C6Q8NH72 309 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 FBXO25Q8TCJ0 367 aa22.16■■□□□ 1.14
C9orf3-209ENST00000460573 DMGDHQ9UI17 866 aaKnown RBP22.16■■□□□ 1.14
C9orf3-209ENST00000460573 KLK13Q9UKR3 277 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms