RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 GPRIN3Q6ZVF9 776 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 FKBP9P1Q75LS8 142 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 AMIGO2Q86SJ2 522 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ZFAND4Q86XD8 727 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PROSER1Q86XN7 944 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 GPSM1Q86YR5 675 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PIANPQ8IYJ0 282 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 TBC1D21Q8IYX1 336 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 CFAP52Q8N1V2 620 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ZFP28Q8NHY6 868 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 SLC39A3Q9BRY0 314 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 NOL11Q9H8H0 719 aaKnown RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 MAGEE1Q9HCI5 957 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 IL17CQ9P0M4 197 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 APPL1Q9UKG1 709 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PHF24Q9UPV7 400 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 DHRS7Q9Y394 339 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 ZNF711Q9Y462 761 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 PTGDR2Q9Y5Y4 395 aa12.4□□□□□ -0.42
ECHDC1-209ENST00000454591 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 A0A1W2PQ45 241 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 A0A1W2PQY0 241 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 ZNF701M0R085 212 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 BTN3A1O00481 513 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 COCHO43405 550 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 TIPRLO75663 272 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 SLC22A3O75751 556 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 CSPG5O95196 566 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 RASAL1O95294 804 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 MT-CO1P00395 513 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 KLKB1P03952 638 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 PRSS56P0CW18 603 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 HMGA1P17096 107 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 MC4RP32245 332 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 GSK3BP49841 420 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 CLCN7P51798 805 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 RPS24P62847 133 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 CACNG1Q06432 222 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 GPNMBQ14956 572 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 GEN1Q17RS7 908 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 TBCELQ5QJ74 424 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 C6orf136Q5SQH8 315 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 TMTC4Q5T4D3 741 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 IYDQ6PHW0 289 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 ADAMTSL2Q86TH1 951 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 EPHX4Q8IUS5 362 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 SNX31Q8N9S9 440 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 LEMD2Q8NC56 503 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 PDPRQ8NCN5 879 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 TNIP2Q8NFZ5 429 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 LRCH3Q96II8 777 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 PLEKHG4BQ96PX9 1271 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 SLC30A3Q99726 388 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 CIB1Q99828 191 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 TMEM79Q9BSE2 394 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 HGH1Q9BTY7 390 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 KLF16Q9BXK1 252 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 YTHDF1Q9BYJ9 559 aaKnown RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 SEMA6AQ9H2E6 1030 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 SEMA4BQ9NPR2 832 aaPredicted RBP12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 LHX3Q9UBR4 397 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 FKBPLQ9UIM3 349 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 BTRCQ9Y297 605 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 CEPT1Q9Y6K0 416 aa12.39□□□□□ -0.43
ECHDC1-209ENST00000454591 ARVCFO00192 962 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 SOCS2O14508 198 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 ACOX3O15254 700 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 AKAP10O43572 662 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 NBNO60934 754 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 CRCPO75575 148 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 GJB5O95377 273 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 PCSK2P16519 638 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 CDH2P19022 906 aaPredicted RBP12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 MSH3P20585 1137 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 RFC2P35250 354 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 CSNK1DP48730 415 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 POLR2JP52435 117 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 DIO3P55073 304 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 ARPP19P56211 112 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 ARF5P84085 180 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 CAP1Q01518 475 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 TRAF2Q12933 501 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 BFSP2Q13515 415 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 NFYCQ13952 458 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 CRY1Q16526 586 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 NRF1Q16656 503 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 SLC36A3Q495N2 470 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 Q6ZSR9 355 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 FIBCD1Q8N539 461 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 LPCAT1Q8NF37 534 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 PXYLP1Q8TE99 480 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 DIS3LQ8TF46 1054 aaKnown RBP12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 GIPC2Q8TF65 315 aa12.38□□□□□ -0.43
ECHDC1-209ENST00000454591 UBTD2Q8WUN7 234 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms