RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 IVDP26440 423 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 MAGEA6P43360 314 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ABCG1P45844 678 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ITGA8P53708 1063 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 MAZP56270 477 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 RPL26P61254 145 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 CTBSQ01459 385 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 GABPB1Q06547 395 aaPredicted RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 CUL1Q13616 776 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 C14orf28Q4W4Y0 310 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 RNASEH2BQ5TBB1 312 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 KCTD11Q693B1 232 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC30A9Q6PML9 568 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 KDELC1Q6UW63 502 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ADAMTSL4Q6UY14 1074 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 B3GNT8Q7Z7M8 397 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SNIP1Q8TAD8 396 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SEC14L1Q92503 715 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 CPT1BQ92523 772 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 GFM1Q96RP9 751 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 TBL1YQ9BQ87 522 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 GSDMCQ9BYG8 508 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 LRRN3Q9H3W5 708 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 TAAR2Q9P1P5 351 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 LRIT1Q9P2V4 623 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ATXN7L1Q9ULK2 861 aaPredicted RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 RPL26L1Q9UNX3 145 aaKnown RBP16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SHOC2Q9UQ13 582 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC17A4Q9Y2C5 497 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 ST14Q9Y5Y6 855 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 LAMA5O15230 3695 aa16.89■□□□□ 0.29
PRPF40A-204ENST00000450303 SUN1O94901 812 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 ASMTLO95671 621 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 NDST3O95803 873 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 FGF1P05230 155 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 IVLP07476 585 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 HOXB3P14651 431 aaPredicted RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 HLA-DPA1P20036 260 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 PDX1P52945 283 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 ILF3Q12906 894 aaKnown RBP eCLIP16.88■□□□□ 0.296e-10■■■■■ 32.4
PRPF40A-204ENST00000450303 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 KCNJ11Q14654 390 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 BEND6Q5SZJ8 279 aaPredicted RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 CERCAMQ5T4B2 595 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 HIBCHQ6NVY1 386 aaPredicted RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNF765Q7L2R6 523 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 LYSMD3Q7Z3D4 306 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 CCNJLQ8IV13 435 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 NRSN1Q8IZ57 195 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 NAT8LQ8N9F0 302 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 MCUQ8NE86 351 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 OR6C4Q8NGE1 309 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 WDR48Q8TAF3 677 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 ZDHHC1Q8WTX9 485 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 PATE1Q8WXA2 126 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 HIC2Q96JB3 615 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 MRGPRX2Q96LB1 330 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 LYSMD1Q96S90 227 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 SRPK1Q96SB4 655 aaKnown RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 GORASP1Q9BQQ3 440 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 FICDQ9BVA6 458 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 FOXP3Q9BZS1 431 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 TRNAU1APQ9NX07 287 aaKnown RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 NBEAQ8NFP9 2946 aa16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 ZFC3H1O60293 1989 aaKnown RBP16.88■□□□□ 0.29
PRPF40A-204ENST00000450303 LOC285095A0A1B0GVY8 99 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC4A1P02730 911 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 GLB1P16278 677 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 SPINT3P49223 89 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 CEP128Q6ZU80 1094 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 NLRP8Q86W28 1048 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 LSMEM2Q8N112 164 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 DNAAF3Q8N9W5 541 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 IFT81Q8WYA0 676 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 PRR11Q96HE9 360 aaPredicted RBP16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 ZNF578Q96N58 590 aaPredicted RBP16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 TRIB3Q96RU7 358 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 FUT8Q9BYC5 575 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 FAM83DQ9H4H8 585 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 XAB2Q9HCS7 855 aaKnown RBP16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 ASCL3Q9NQ33 180 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 MTRF1LQ9UGC7 380 aaKnown RBP16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 PRKAB1Q9Y478 270 aa16.87■□□□□ 0.29
PRPF40A-204ENST00000450303 TRBV23OR9-2A0A075B6M9 112 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 FADS2P1A8MWK0 482 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 BHMG1C9JSJ3 638 aaPredicted RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 AGTP01019 485 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 MLNP12872 115 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 RBMS1P29558 406 aaKnown RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 ADRA1AP35348 466 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 ACTR1BP42025 376 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 PLTPP55058 493 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 ACTR1AP61163 376 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 CDH17Q12864 832 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 SPARCL1Q14515 664 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 SLC1A5Q15758 541 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 KCTD19Q17RG1 926 aaPredicted RBP16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 ALS2CLQ60I27 953 aa16.86■□□□□ 0.29
PRPF40A-204ENST00000450303 LRRC8BQ6P9F7 803 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms