RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 NOL3O60936 208 aaKnown RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 CD247P20963 164 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ALDH3A2P51648 485 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF140P52738 457 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ARSFP54793 590 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 OR4D2P58180 307 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 NFATC3Q12968 1075 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 NEDD8Q15843 81 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 TIGD2Q4W5G0 525 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 C6orf136Q5SQH8 315 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 SFRP1Q8N474 314 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 OR56A4Q8NGH8 313 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 TANKQ92844 425 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ACDQ96AP0 544 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 RNF145Q96MT1 663 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 TRIB3Q96RU7 358 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 HGH1Q9BTY7 390 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 CCDC68Q9H2F9 335 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 TDRKHQ9Y2W6 561 aaKnown RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 SH3GLB1Q9Y371 365 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 FOXD2O60548 495 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-204ENST00000447182 KPNA6O60684 536 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 DEAF1O75398 565 aaPredicted RBP18.9■□□□□ 0.62
SDCBP-204ENST00000447182 SEC14L2O76054 403 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 NDST3O95803 873 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 FMO4P31512 558 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 POLR2IP36954 125 aaKnown RBP18.9■□□□□ 0.62
SDCBP-204ENST00000447182 YAP1P46937 504 aaKnown RBP18.9■□□□□ 0.62
SDCBP-204ENST00000447182 AGTR2P50052 363 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 C21orf59P57076 290 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 PRKG2Q13237 762 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF235Q14590 738 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 GLYATQ6IB77 296 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 TRIM74Q86UV6 250 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 TRIM73Q86UV7 250 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 PLEKHA8Q96JA3 519 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 COX4I2Q96KJ9 171 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 MUS81Q96NY9 551 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 PCDHB8Q9UN66 801 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 USP22Q9UPT9 525 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 SLC30A1Q9Y6M5 507 aa18.9■□□□□ 0.62
SDCBP-204ENST00000447182 MT-ND1P03886 318 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 ALPLP05186 524 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 SERPINF2P08697 491 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 PRSS56P0CW18 603 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 CCNA2P20248 432 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 PSMA3P25788 255 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 CD97P48960 835 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 MGAT3Q09327 533 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 DAG1Q14118 895 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 SLC39A12Q504Y0 691 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 FBXO48Q5FWF7 155 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 UGT3A1Q6NUS8 523 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 AFTPHQ6ULP2 937 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 DLEU7Q6UYE1 221 aa18.89■□□□□ 0.62
SDCBP-204ENST00000447182 A0A0U1RQF3 1178 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 NPEPPSL1A6NEC2 478 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 ARNTLO00327 626 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 MGEA5O60502 916 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 OR4Q2P0C623 313 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 PIRTP0C851 137 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 RAP2AP10114 183 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 CD9P21926 228 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 MATN1P21941 496 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 UGT1A1P22309 533 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 UGT1A4P22310 534 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 CES1P23141 567 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 UGT1A3P35503 534 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 UGT1A5P35504 534 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 ACVRL1P37023 503 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 CASP2P42575 452 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 MAPKAPK2P49137 400 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 EFEMP1Q12805 493 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 TRIP4Q15650 581 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-204ENST00000447182 BROXQ5VW32 411 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 RAP1GAP2Q684P5 730 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 XKR5Q6UX68 686 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 GPRIN3Q6ZVF9 776 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 CHST15Q7LFX5 561 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-204ENST00000447182 DDHD1Q8NEL9 900 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 C8orf48Q96LL4 319 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 RDH12Q96NR8 316 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 ZNF382Q96SR6 550 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 GPR21Q99679 349 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 C1orf50Q9BV19 199 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 PDFQ9HBH1 243 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 HEBP1Q9NRV9 189 aa18.89■□□□□ 0.61
SDCBP-204ENST00000447182 ABI2Q9NYB9 513 aaPredicted RBP18.89■□□□□ 0.61
SDCBP-204ENST00000447182 BTN3A1O00481 513 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 NDUFS3O75489 264 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 TSPAN12O95859 305 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 HPRP00739 348 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 CACNB2Q08289 660 aaPredicted RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 BNIP3Q12983 259 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 RBBP7Q16576 425 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 ATP6AP1LQ52LC2 224 aa18.88■□□□□ 0.61
SDCBP-204ENST00000447182 RBM48Q5RL73 367 aaKnown RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 TMEM214Q6NUQ4 689 aaKnown RBP18.88■□□□□ 0.61
SDCBP-204ENST00000447182 FNDC5Q8NAU1 212 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms