RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 PACRGLQ8N7B6 248 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 ARL10Q8N8L6 244 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 CDKN2AIPNLQ96HQ2 116 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 PANX1Q96RD7 426 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 HIPK3Q9H422 1215 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 BCKDKO14874 412 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 CNTN5O94779 1100 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 ZNF182P17025 639 aaPredicted RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 CHI3L1P36222 383 aaPredicted RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 KRT33BQ14525 404 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 ADCK2Q7Z695 626 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 PNPT1Q8TCS8 783 aaKnown RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 HPS1Q92902 700 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 CAMKK2Q96RR4 588 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 TFB2MQ9H5Q4 396 aaKnown RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 EXD2Q9NVH0 621 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 DNMT3LQ9UJW3 386 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 RBMX2Q9Y388 322 aaKnown RBP12.52□□□□□ -0.41
CPNE4-201ENST00000429747 DLEC1Q9Y238 1755 aa12.52□□□□□ -0.41
CPNE4-201ENST00000429747 AGRPO00253 132 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 MAGEB3O15480 346 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ASNA1O43681 348 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SNAP29O95721 258 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 IFNA8P32881 189 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ACVRL1P37023 503 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ERVK-8P63133 956 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 DAG1Q14118 895 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 FOXB2Q5VYV0 432 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TAPT1Q6NXT6 567 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SH2D5Q6ZV89 423 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RNF180Q86T96 592 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TMBIM1Q969X1 311 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 MRGPRX2Q96LB1 330 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 FEM1AQ9BSK4 669 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 PCDH12Q9NPG4 1184 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 PCDHGA7Q9Y5G6 932 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 A0A1W2PP18 115 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 DYTNA2CJ06 578 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 MEIS3P2A8K0S8 358 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 CDK14O94921 469 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ARSAP15289 507 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TYMPP19971 482 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TACR2P21452 398 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 PFKPQ01813 784 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 FBXL22Q6P050 247 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 NLGN2Q8NFZ4 835 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RSPH1Q8WYR4 309 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RBM4BQ9BQ04 359 aaKnown RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RBM4Q9BWF3 364 aaKnown RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 LRTM1Q9HBL6 345 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SMOXQ9NWM0 555 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 MARCH4Q9P2E8 410 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 EBF1Q9UH73 591 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SNX8Q9Y5X2 465 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 BTAF1O14981 1849 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SLC28A1O00337 649 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 IL7RP16871 459 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 IGFBP5P24593 272 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RPL10P27635 214 aaKnown RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 IL10RBQ08334 325 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 LAPTM5Q13571 262 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 IFNLR1Q8IU57 520 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 FIBCD1Q8N539 461 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 MCOLN3Q8TDD5 553 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 HTRA1Q92743 480 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 BIRC7Q96CA5 298 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RPL10LQ96L21 214 aaKnown RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 APOLD1Q96LR9 279 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 INTS10Q9NVR2 710 aaKnown RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ADPRHL2Q9NX46 363 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RIMS3Q9UJD0 308 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SLC25A14O95258 325 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RAP2AP10114 183 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 SEPHS1P49903 392 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ARSDP51689 593 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 HMGCS1Q01581 520 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 PLD1Q13393 1074 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TRIP4Q15650 581 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 USP50Q70EL3 339 aaPredicted RBP12.51□□□□□ -0.41
CPNE4-201ENST00000429747 HID1Q8IV36 788 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 LILRA2Q8N149 483 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 OR10Q1Q8NGQ4 319 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 RAB2BQ8WUD1 216 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 ANKRD49Q8WVL7 239 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 TMEM209Q96SK2 561 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 KRT84Q9NSB2 600 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 GNPTGQ9UJJ9 305 aa12.51□□□□□ -0.41
CPNE4-201ENST00000429747 FAM234BA2RU67 622 aa12.5□□□□□ -0.41
CPNE4-201ENST00000429747 CLDN25C9JDP6 229 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms