RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 ANKRD66B4E2M5 251 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 KMOO15229 486 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 MT-ND3P03897 115 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZNF7P17097 686 aaPredicted RBP18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 CCNCP24863 283 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 RPL10P27635 214 aaKnown RBP18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 GJC1P36383 396 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 CD86P42081 329 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 SEMA5AQ13591 1074 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 DPYSL3Q14195 570 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 PAFAH1B3Q15102 231 aaKnown RBP18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 CYB5D1Q6P9G0 228 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 LRRTM4Q86VH4 590 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 FATE1Q969F0 183 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZDHHC12Q96GR4 267 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 TSGA13Q96PP4 275 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 ADGRE3Q9BY15 652 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 TRIM55Q9BYV6 548 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 LHX9Q9NQ69 397 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 POT1Q9NUX5 634 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 DTLQ9NZJ0 730 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 CACNA1DQ01668 2161 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 MED13Q9UHV7 2174 aa18.01■□□□□ 0.47
UPK3BP1-201ENST00000428678 SHANK1Q9Y566 2161 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GOLGA6L3A6NEY3 463 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 OR52A4PA6NMU1 304 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR89AB7ZAQ6 455 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 C21orf140B9A014 251 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 TIAF1O95411 115 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 RECKO95980 971 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR89BP0CG08 455 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 PGDP52209 483 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR18Q14330 331 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GALNT3Q14435 633 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GPR26Q8NDV2 337 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 KLHL6Q8WZ60 621 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 GLYATL1Q969I3 302 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 CXorf40BQ96DE9 158 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZSCAN5AQ9BUG6 496 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 NUP85Q9BW27 656 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 BRD8Q9H0E9 1235 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 THAP2Q9H0W7 228 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 ZFYVE1Q9HBF4 777 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 PDE7BQ9NP56 450 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 RTN4Q9NQC3 1192 aaKnown RBP18■□□□□ 0.47
UPK3BP1-201ENST00000428678 TRIM10Q9UDY6 481 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 CELSR2Q9HCU4 2923 aa18■□□□□ 0.47
UPK3BP1-201ENST00000428678 DOPEY1Q5JWR5 2465 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 LRBAP50851 2863 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 CHUKO15111 745 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 MTX2O75431 263 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 MMP2P08253 660 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 PIRTP0C851 137 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 BRAFP15056 766 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 NELFEP18615 380 aaKnown RBP17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 TUBB3Q13509 450 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 HADHQ16836 314 aaKnown RBP17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 CCDC183Q5T5S1 534 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 KCTD6Q8NC69 237 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 CCNYQ8ND76 341 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 FAM71BQ8TC56 605 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 SSC4DQ8WTU2 575 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 EID2BQ96D98 161 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 TIMM29Q9BSF4 260 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 RARRES3Q9UL19 164 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 SHOC2Q9UQ13 582 aa17.99■□□□□ 0.47
UPK3BP1-201ENST00000428678 JCHAINP01591 159 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 MX2P20592 715 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 IDSP22304 550 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 ARSEP51690 589 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 DCDC1P59894 354 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 RPS18P62269 152 aaKnown RBP17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 GBE1Q04446 702 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 KCNAB1Q14722 419 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 ATP13A4Q4VNC1 1196 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 CPZQ66K79 652 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 PWWP2BQ6NUJ5 590 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 ABRAXAS1Q6UWZ7 409 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 RBM12BQ8IXT5 1001 aaKnown RBP17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 TRAM1L1Q8N609 369 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 SIDT2Q8NBJ9 832 aaKnown RBP17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 SEC14L1Q92503 715 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 SLC25A23Q9BV35 468 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 RAD18Q9NS91 495 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 EPHA6Q9UF33 1036 aa17.98■□□□□ 0.47
UPK3BP1-201ENST00000428678 MYO1FO00160 1098 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 KCNK1O00180 336 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 VEGFDO43915 354 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 CDK14O94921 469 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 FOLR1P15328 257 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 PPP1CAP62136 330 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 UGT8Q16880 541 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 NADK2Q4G0N4 442 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 FILIP1LQ4L180 1135 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 AGAP9Q5VTM2 703 aa17.97■□□□□ 0.47
UPK3BP1-201ENST00000428678 PDPK2PQ6A1A2 396 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms